Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001675595.1_202016-06-23] 7,154 sequences; 41,344,138 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq628 187 3e-42 seq1449 104 3e-17 seq898 89.7 6e-13 >seq628 Length=19608 Score = 187 bits (206), Expect = 3e-42 Identities = 1121/1775 (63%), Gaps = 41/1775 (2%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 |||||| ||||| ||||||| || || | ||||| || || ||||||| ||| Sbjct 4718 CCACAGCACATGATCATGCGTGTTGCTGTAGGTATCTGGGGTGACAACATTGAGCGAGTC 4659 Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTA--TGTTCATTCACGCAACACCAACCCTCT 104339 | || || ||| || ||||| || | | |||| ||||| | || || || | Sbjct 4658 ATCGAAACCTACAACCTTATGTCT--AGCAAATTCTTCACACACGCCTCCCCGACGCTTT 4601 Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399 |||| || || ||||| | || |||| |||||||| | | | ||||| | Sbjct 4600 TCAACGCCGGCACACCGCAGGCTCAGTTGTCGTCATGCTTCCTGGTTGATATGAAGGACG 4541 Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459 || || | || ||||| | || || | | ||||| ||||| ||| ||||| Sbjct 4540 ACAGCATTGAGGGAATCTACGACACCCTCAAGACTTGTGCCATGATCTCCAAGATGGCTG 4481 Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-AC 104517 | ||||| || | || ||||| | | |||| | ||| ||| ||| || || Sbjct 4480 GCGGTATCGGTCTCAACGTCCATCGCATCCGTGCCACTGG--CTCCTATATCGCCGGTAC 4423 Query 104518 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 104577 || || || | || ||| |||| ||||| || || || ||| |||||| ||||| Sbjct 4422 CAACGGCACCTCGAACGGCATTGTTCCCATGCTGCGTGTGTTCAACAACACAGCTCGCTA 4363 Query 104578 TGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGC 104633 || | || | ||| | | | | || | | || |||| |||||||| |||| Sbjct 4362 CGTCGACCAGGGTGG-CAACAAGCGCCCCGGTGCCTTTGCCATCTACCTTGAGCCGTGGC 4304 Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693 |||| ||| || | |||||||| || | | ||||| || | |||||| || Sbjct 4303 ACGCAGATGTCTTCGAGTTCCTCGACCTAAGGAAGAACCACGGAAAGGAGGAGATTCGTG 4244 Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 ||| || || ||| |||||| ||||| || ||||| ||||||||| | |||||| | | Sbjct 4243 CCCGTGACCTGTTCCTCGCTCTTTGGATCCCTGATCTGTTCATGAAGCGCGTTGAGAAAA 4184 Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTG 104813 ||| | ||| | | | || || || || ||||| ||| | || | |||| Sbjct 4183 ACGGCGACTGGACCTTGATGTGCCCGAACGAGTGCCCTGGCCTCGCGGACTGCTACGGTG 4124 Query 104814 AGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC--GACGGT 104871 | ||||| || || || || ||||| ||| | | ||| || | | || |||| | Sbjct 4123 AAGAGTTCGAGGCTCTGTATGAGAAGTATGAGCAGGCCGGTAAGG-GTC-GCAAGACGAT 4066 Query 104872 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930 | || | || | ||| | | || || || |||| || |||||||||| || | Sbjct 4065 -CAAGGCCCAGAAACTTTGGTACTCCATCCTGGAGGCTCAGACTGAGACTGGTAACCCGT 4007 Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990 |||||| ||||| || ||| |||| ||||| || || ||||| | ||| || Sbjct 4006 TCATGCTGTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTTGGTACCATTC 3947 Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 105050 || ||||| ||||| || || || | || | | | | || ||| ||||| | Sbjct 3946 GCAGCTCCAACCTCTGCACGGAGATTATCGAGTACTCTGCCCCTGACGAGGTTGCTGTAT 3887 Query 105051 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGAT--CCAGAGACAAAGACATTTGA 105108 | ||||| || || | ||||| ||| ||| || || ||| | | || || || Sbjct 3886 GCAACCTTGCTTCCCTGGCTCTGCCCCAGTTCGTCGACTACCACA-AGGGTGA-ATACGA 3829 Query 105109 TTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGA 105168 | ||| |||||||| || || || || || ||||| |||| | || || Sbjct 3828 CTTTGAGAAACTCCATGAGGTCACTCAAGTCGTTGTTCGCAACCTCAACAAGATCATCGA 3769 Query 105169 TAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGG 105228 || | |||||||| || || || || || ||| | ||| | || || || Sbjct 3768 AGTCAACTACTACCCCGTCCAGGAGGCACGCAACAGCAACATGCGCCACAGGCCTATCGG 3709 Query 105229 TCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT---CTTTGTCGCCACGCATTTGATTC 105285 ||| || || || ||||| || || | ||| || || ||| | | || || || Sbjct 3708 TCTGGGCGTCCAAGGTCTGGCTGACGCTTTCCTTGCACTCCGTCTGC---CTTTCGAGTC 3652 Query 105286 CGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGA 105345 || || || |||| | || ||||||||||| || ||||| ||||| Sbjct 3651 TCCTGAGGCTCGTGATCTCAACAAGAAGATCTTTGAGACCATCTACCACGCTGCTCTGAC 3592 Query 105346 GGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGC 105405 || || || ||||||||| | |||||||| || | ||||| ||||| | Sbjct 3591 TGCCTCTTGCAAGCTGGCAGAGGAGCAGGGTCCATACTCGACATACGAGGGATCTCCTGT 3532 Query 105406 TTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTG 105465 |||||| || | || || | ||| |||||| | | || || | || ||||| Sbjct 3531 TTCACAGGGCATTCTCCAGTATGACATGTGGAACGTCAAGCCCTCAGACCTCTGGGACTG 3472 Query 105466 GGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCC 105525 ||| |||||||||| ||||||| | | ||| | || ||||| | ||| | || || Sbjct 3471 GGACGCTCTCAAGGCCAACATCAAGCAACATGGTGTCCGCAACAGCTTGCTCGTTGCCCC 3412 Query 105526 AATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACAC 105585 ||||| ||||| ||| | |||||| | || || || || |||||||| ||||| || Sbjct 3411 CATGCCTACAGCTAGCACGTCGCAAATCCTTGGCAACAACGAGTGCTTTGAGCCCTATAC 3352 Query 105586 GACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA---CAAGCA 105642 | ||||| || | | | || || || ||||| | | ||||| | | Sbjct 3351 TTCCAACATTTACCAACGCCGTGTGCTTGCCGGCGAGTTCCAGGTAGTCAACCCCTGGTT 3292 Query 105643 TCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGT 105702 ||| |||| || ||| ||||||| ||||| | || |||||| | | || | Sbjct 3291 GCTCAAGGAT---CTGGTCGAGCTTGGTCTGTGGTCAGACGACATGAAGAACCGTATCAT 3235 Query 105703 GAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTTGTA 105762 | ||| || ||||| || || |||| || || | || | |||||| | || Sbjct 3234 CGCCGAGGGAGGCTCCATCCAGAACATTGCCAGCATCCCTGAGGATACCAAGAAGCTCTA 3175 Query 105763 CCGCACAGTTTGGGAAATCAAGATGAAGGA-TGTCATTGACATGGCCGCAGATCGTGGTC 105821 | || |||||||| ||| | | | | ||| || | |||||||| || |||||| Sbjct 3174 CAAGACTGTTTGGGAGATCTCG-CAACGTACCGTCGTTCAGATGGCCGCTGACCGTGGTG 3116 Query 105822 GCTTCATTGATCAAAGTCAAAGT--ATGAATCTCTTCATGGAAAGTCCAACGATGTCCAA 105879 ||||||||| | |||| ||| | || || |||| || || ||| ||| Sbjct 3115 CCTTCATTGACC--AGTCCCAGTCGCTCAACATCCACATGCGCGACCCGACCATGGGCAA 3058 Query 105880 GCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCT 105939 | || | || ||||| | | | |||||| |||||||| || || ||||| ||||| Sbjct 3057 GATCACCTCGATGCATTTCACCGGCTGGAAGCTTGGTCTCAAGACCGGTATGTACTACCT 2998 Query 105940 CCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCA 105974 || | ||||| || | || |||||||||| Sbjct 2997 GCGGACGCAGGCAGCCGCCCAGCCGATTCAGTTCA 2963 >seq1449 Length=8806 Score = 104 bits (114), Expect = 3e-17 Identities = 161/226 (71%), Gaps = 8/226 (4%) Strand=Plus/Plus Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGTC 94790 ||| || || || | ||||| || || |||||| ||| |||| | || | ||||| Sbjct 7086 AGTCCCCTGCATCCGCAAGAAGGCCGACTGGGCTCTGAGGTGGATCACCGACAAGAAGTC 7145 Query 94791 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGT-GTTGAGGGTATCTTCTTCTCTG 94849 ||||||| ||| || |||| || || ||| || ||||||||||||||| | Sbjct 7146 AA---CCTTTGCCACGCGCCTGATCGCTTTCGC-TGTCGTCGAGGGTATCTTCTTCAGCG 7201 Query 94850 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909 || | || | | || | |||||||||||||| || || ||||| ||||| |||| Sbjct 7202 GTGCTTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTGACTTTCT 7261 Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||||||||| ||||| ||||| ||||| || ||| || ||||| Sbjct 7262 CCAACGAGCTCATCTCGCGTGATGAGGGTCTACACACCGACTTTGC 7307 >seq898 Length=14780 Score = 89.7 bits (98), Expect = 6e-13 Identities = 211/317 (67%), Gaps = 4/317 (1%) Strand=Plus/Plus Query 9704 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGA 9763 ||||| || || || ||||||| |||||| || | || ||| || | | || || Sbjct 12767 GCATCGATTTCGTCGATGAAGATGATGCAAGGAGCGTGTTTGCGCGCCTCCTTGAACAGG 12826 Query 9764 TCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG--CGGCGGAAC 9821 || || ||||| || || ||||| |||||||| || || || | || | | || Sbjct 12827 TCTCGCACACGAGACGCACCGACACCGACAAACATTTCGACGAACTCTGAACCACTGACG 12886 Query 9822 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9881 | || |||||| || || ||||| || | || ||| | ||| |||||||||| Sbjct 12887 CT--GAAGAAGGGCACGCCCGACTCACCGGCCGTAGCCTTGGCCAAAAGCGTCTTACCCG 12944 Query 9882 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCCAAAGTATC 9941 | ||||| ||| | || | |||||| ||||||||||||||||| | || | | Sbjct 12945 TTCCTGGAGGACCGGACAGAATGGCACCACGTGGAATCTTGGCGCCCAACCGAACGAACT 13004 Query 9942 TCTCAGGTTGCTTAAGAAAATCCACAATTTCTTCCAATTCATCTTTGGCGGCGTCAATCC 10001 |||| ||| ||| || || ||||| ||| | | |||| ||||| ||||| | Sbjct 13005 TCTCCGGTGTCTTCAGGAAGCTCACAAATTCGACAATTTCAAGCTTGGCCTCGTCAGCAC 13064 Query 10002 CCTCAACATCGGTAAAC 10018 | | || |||| |||| Sbjct 13065 CGGCTACGTCGGCAAAC 13081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583208641902960