Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001675595.1_202016-06-23] 7,154 sequences; 41,344,138 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq205 143 8e-29 seq1041 120 9e-22 seq583 84.2 7e-11 >seq205 Length=32748 Score = 143 bits (158), Expect = 8e-29 Identities = 432/664 (65%), Gaps = 11/664 (2%) Strand=Plus/Minus Query 349265 ATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACT 349324 || || || ||||| || |||||| ||||||| || || | ||| || || || || || Sbjct 17023 ATTATCGCCAATGACCAGGGTAACCGAACAACCCCGTCCTTCGTGGCGTTCACGGATACC 16964 Query 349325 GAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTT 349384 |||||| ||||||| ||| | || || || || | ||| || || | || || || Sbjct 16963 GAGCGTCTGATTGGAGATGCGGCCAAGAACCAGGTCGCTATGAACCCCCACAACACCGTC 16904 Query 349385 TTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACACAATCTGA 349440 || || || ||| | | |||||| | | || || ||| | || || | || Sbjct 16903 TTCGACGCGAAGAGGTTGATTGGTCGCAAGTTCTCCGACGCTGAGGTC----CAGGCCGA 16848 Query 349441 TCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGT 349500 | || || || || || | || || | | | | | || || || | |||||||| Sbjct 16847 CATGAAGCACTTCCCCTTCAAGGTCGT-CGAGAGGTC--TGGCAAGCCTGTCATTGAGGT 16791 Query 349501 TGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGT 349560 || | || || || ||| || || || || || || ||||| ||||| || Sbjct 16790 CGAGTTCAAGGGAGAGTCAAAGCAGTTCACTCCTGAGGAGATCTCATCCATGGTCTTGAC 16731 Query 349561 TAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTAC 349620 || ||| || | |||||| | || | |||| || || | | ||||| | || Sbjct 16730 CAAGATGCGTGAGACTGCTGAGTCTTACCTTGGTGGCACCGTCAACAACGCTGTCGTCAC 16671 Query 349621 TGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGC 349680 || || ||||| || || || | |||||| || || || ||||| || |||||| Sbjct 16670 CGTCCCCGCCTACTTCAACGACTCGCAGCGTCAGGCTACCAAGGATGCCGGTCTCATTGC 16611 Query 349681 GGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCT 349740 || | || || || | || || || || || ||||| || || || || || || || Sbjct 16610 TGGTCTGAACGTCCTCCGTATCATCAACGAGCCTACTGCCGCCGCCATCGCCTACGGTCT 16551 Query 349741 TGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTT 349800 ||| || | | || || || | |||||||| ||| | |||||||||||||| Sbjct 16550 TGACAAGAAGGTCGAGGGTGAGCGCAACGTGCTTATTTTCGATCTTGGTGGTGGTACTTT 16491 Query 349801 TGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGA 349860 ||||| || || || || |||| ||||| || || || || || | || |||||||| Sbjct 16490 CGATGTGTCGCTCCTTACCATTGAGGAGGGTATCTTCGAGGTCAAGTCCACCGCTGGTGA 16431 Query 349861 TACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATT 349920 || || | ||||| || || ||||| || ||| | ||| | || || | || || || Sbjct 16430 CACCCACTTGGGTGGTGAGGACTTTGACAACCGTTTGGTTACTCACTTCGCCAACGAGTT 16371 Query 349921 TAAG 349924 ||| Sbjct 16370 CAAG 16367 >seq1041 Length=12260 Score = 120 bits (132), Expect = 9e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| |||||||| | | || || | ||| || || ||| ||||| || || || || Sbjct 2682 CATGCCACCACGGAGACGAAGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTC 2741 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || ||||| || |||||||| || || || ||||| || || || Sbjct 2742 GGAAAGGGTCCGACCGTCCTCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGG 2801 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| || || || ||||| || || | |||||||| || || | ||| || | || Sbjct 2802 AGGAATACCCTCCTTGTCCTGGATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTC 2861 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || | |||| ||||| || || || ||||| || ||||||||||| Sbjct 2862 GACCTCCAAGGTAATCGTCTTGCCAGTGAGGGTTTTGACGAAAATCTGCAT 2912 Score = 113 bits (124), Expect = 1e-19 Identities = 166/235 (71%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || | || |||||||| || ||||| || || | Sbjct 2450 TTTGCATACCACCACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGT 2509 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || ||||| || | || |||||||| ||||| || || || || | Sbjct 2510 AGTCGGACAGCGTGCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGT 2569 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | |||||||| || || || || || || || | ||| ||||| ||||||| || || | Sbjct 2570 CCGGAGGAATACCCTCCTTGTCTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAG 2629 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || | || | ||||| || || | || || || || |||||||| Sbjct 2630 ACTCGACCTCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 2684 >seq583 Length=20149 Score = 84.2 bits (92), Expect = 7e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609 || || || || || || || | || || || || || || || || ||||||||||| Sbjct 9870 TTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCCAGCTGCTTGCCAGCAAAGATA 9811 Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669 ||||| || || ||||| |||||||| || || |||||||| || | || ||||| || Sbjct 9810 AGACGCTGTTGGTCAGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 9751 Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAA 140728 |||| || || | || || || | || | ||||| || || || || || || || Sbjct 9750 ATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAA 9692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515115510834662