Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001675595.1_202016-06-23] 7,154 sequences; 41,344,138 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq628 277 2e-69 seq1136 109 6e-19 seq1449 87.8 2e-12 >seq628 Length=19608 Score = 277 bits (306), Expect = 2e-69 Identities = 530/774 (68%), Gaps = 18/774 (2%) Strand=Plus/Minus Query 53174 GAGACGCCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACG 53233 |||| ||| ||| | | ||||||| || || | |||||| |||||| || | Sbjct 4724 GAGAGGCCACAGCACATGATCATGCGTGTTGCTGTAGGTATCTGGGGTGACAACATTGAG 4665 Query 53234 CGTGTCCGTGAGACGTACGACTTAATG---AGCCAAAAGTACTTTACGCACGCCACGCCA 53290 || ||| || || ||| || | ||| ||| || | ||| || |||||| | || Sbjct 4664 CGAGTCATCGAAACCTACAACCTTATGTCTAGCAAA---TTCTTCACACACGCCTCCCCG 4608 Query 53291 ACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATG 53350 || || |||||||| || || || ||||| ||||| ||||||||||| | ||| Sbjct 4607 ACGCTTTTCAACGCCGGCACACCGCAGGCTCAGTTGTCGTCATGCTTCCTGGTTGATATG 4548 Query 53351 AAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAG 53410 ||||| ||| || || || |||||||| || |||||| |||||| ||||||||| Sbjct 4547 AAGGACGACAGCATTGAGGGAATCTACGACACCCTCAAGACTTGTGCCATGATCTCCAAG 4488 Query 53411 TGGTCGGGTGGTATCGGTATCCACTGC--TCGAACGTCCGTGCGAACGGCACACCAATCA 53468 | | || ||||||||| || || | ||| | ||||||| | ||| | ||| Sbjct 4487 ATGGCTGGCGGTATCGGTCTCAACGTCCATCGCA--TCCGTGCCACTGGCTCCTATATCG 4430 Query 53469 AGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGG 53528 || || |||||| | | | || || || || ||||| || || ||||||||||| | Sbjct 4429 CCGGTACCAACGGCACCTCGAACGGCATTGTTCCCATGCTGCGTGTGTTCAACAACACAG 4370 Query 53529 CCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGC 53588 | || |||||| |||||||||| |||||| || | || ||||||||||| |||| Sbjct 4369 CTCGCTACGTCGACCAGGGTGGCAACAAGCGCCCCGGTGCCTTTGCCATCTACCTTGAGC 4310 Query 53589 CGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGA 53648 |||||||||| || | | ||||| ||||| || | ||| || || | || |||| Sbjct 4309 CGTGGCACGCAGATGTCTTCGAGTTCCTCGACCTAAGGAAGAACCACGGAAAGGAGGAGA 4250 Query 53649 TGCGCTGCCGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGG 53708 | || |||||||||||| ||||| ||||| || || || |||||| | || | Sbjct 4249 TTCGTGCCCGTGACCTGTTCCTCGCTCTTTGGATCCCTGATCTGTTCATGAAGCGCGTTG 4190 Query 53709 AGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCT 53768 |||| ||| || ||| | |||||||||||||||||||||| |||||| || || Sbjct 4189 AGAAAAACGGCGACTGGACCTTGATGTGCCCGAACGAGTGCCCTGGCCTCGCGGACTGCT 4130 Query 53769 ACGGTGAGGAGTTTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAG---- 53824 ||||||| ||||| | | ||||| || ||| | || || ||||| || | Sbjct 4129 ACGGTGAAGAGTTCGAGGCTCTGTATGAGAAGTATG-AG--CA-GGCCGGTAAGGGTCGC 4074 Query 53825 AAGAAGGTCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGA 53884 |||| | ||||||| | | | ||| | | ||||| || ||| ||||| || Sbjct 4073 AAGACGATCAAGGCCCAGAAACTTTGGTACTCCATCCTGGAGGCTCAGACTGAGACTGGT 4014 Query 53885 ACGCCGTACATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938 | |||| |||| ||||||||| |||| |||||||||||||||||| Sbjct 4013 AACCCGTTCATGCTGTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAAC 3960 Score = 104 bits (114), Expect = 3e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 55787 GCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCT 55846 ||||| |||||||| | ||| |||||||||||||| || |||||| |||| | || Sbjct 3128 GCTGACCGTGGTGCCTTCATTGACCAGTCCCAGTCGCTCAACATCCACATGCGCGACCCG 3069 Query 55847 TCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGT 55906 | ||| |||| | | ||||||||| || ||| |||||| || |||||||| ||| Sbjct 3068 ACCATGGGCAAGATCACCTCGATGCATTTCACCGGCTGGAAGCTTGGTCTCAAGACCGGT 3009 Query 55907 ATGTACTATCTGCGGAC 55923 |||||||| |||||||| Sbjct 3008 ATGTACTACCTGCGGAC 2992 >seq1136 Length=11399 Score = 109 bits (120), Expect = 6e-19 Identities = 296/452 (65%), Gaps = 6/452 (1%) Strand=Plus/Minus Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935 || |||||||| || || || ||||||||||||| ||| || | || ||| ||||||| | Sbjct 8386 CCAGTACCGATACCGTCGGCGCCGTTGACCAGAACCATGGGAATAACAGGCGCGTAAACC 8327 Query 151936 TCCGGCTCCA---CCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCC 151992 | || || | ||| | || ||||| | | || | || ||||| | ||| Sbjct 8326 TTGGGTTCGATGGCCTTT---CCATCATCGACCTGGTGCTGCAGAACGGGCTCATCAAGG 8270 Query 151993 GGATCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGGCC 152052 || | || | || || | | ||| | || ||| || || || | ||||||| Sbjct 8269 GGGTTAAACACACGGCGCGCAAAAGGGGAGAGGCGAGTGTGAATATAACGAGCGCTGGCC 8210 Query 152053 GCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGG 152112 ||||| | |||||| || || | ||||| | ||||| || || || ||||| | Sbjct 8209 GCATCGCTACCACCTTGAAGTCGAGAACCAAAGTTGCCAGAAGGTTCCAGACAGTTGACG 8150 Query 152113 TTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCA 152172 || |||| ||| || | || || || | | | || || ||||||| || ||| Sbjct 8149 TTATTGGAGCCTACATAGTTTTGCGCTAGACCTATGATTGTCTGCTGCAGAGAAGCCTCA 8090 Query 152173 CCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCC 152232 |||||||| || || | || ||| | || |||||| |||| | | |||||| | ||| Sbjct 8089 CCGTGGTGGTAAGCAGCCTTCTCTGAGACGTATCCAGCCAGTTCGACGACCTTCTTATCC 8030 Query 152233 GTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAACCG 152292 | |||||| | || | |||||| | || ||||| ||||| ||||| | || Sbjct 8029 TTGACCAGGTTTTGTTTAAAGCAGGCGAAGATGACCTTCCGCTGTCCAGGTTTTAGTCCA 7970 Query 152293 TCCACCACGTGAGGAATCGAACGCTTGATGTC 152324 || | || | || || |||||| || |||| Sbjct 7969 TCAATCATGGACGGGATTGAACGCATGTTGTC 7938 Score = 86.0 bits (94), Expect = 7e-12 Identities = 90/117 (77%), Gaps = 6/117 (5%) Strand=Plus/Minus Query 119074 ACTGAACACGTTGGCTAGCTTGGCACCGTATCCGTTCCGACCACCGGTCACGCGCT---G 119130 |||||| | ||||| ||||| || || |||||||| ||||| || |||| || | Sbjct 6329 ACTGAAAATGTTGGTGAGCTTTGCGCCATATCCGTTACGACCTCC---CACGGTCTTGAG 6273 Query 119131 CTCCTCGTCGTTGTAGTTGGAGCTGGTCAAAAGGTGCCCAAAGATGAGCTCGGGGAT 119187 ||||| ||||| ||||||||| | |||| ||||| || ||||||||||| ||||| Sbjct 6272 CTCCTTGTCGTCGTAGTTGGAACCCGTCAGGAGGTGACCGAAGATGAGCTCCGGGAT 6216 >seq1449 Length=8806 Score = 87.8 bits (96), Expect = 2e-12 Identities = 178/262 (68%), Gaps = 7/262 (3%) Strand=Plus/Minus Query 75009 TCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAAC 75068 ||||||| | | |||| |||| || ||||| ||||| || ||||| ||| | | Sbjct 6978 TCCTTGATGTACGTGTCGATCAGGAGCGAGTAAGTCTCGGAGTGAATGTTCTCCATCATG 6919 Query 75069 GACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATC--CTTTGAAAAATTCA 75126 |||| | ||||||| | || ||||| | |||||| || || | |||| ||| Sbjct 6918 ATCTGGAAGCCGTAGAAGCAACGGGCCTCGGGAATCTGGACTTCGGCGCTGAATCGCTCA 6859 Query 75127 TGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGA 75186 ||| ||||| |||||||||| || || |||||||| || || || | | || Sbjct 6858 A--CGAGGTTCTCGTTGACGATGCCATCAGAAGCGGCGAAGAATGCAAGGATGTGTGAGA 6801 Query 75187 TAAAGTGGCGCTCATCGTCAGTGAGTTTGTC---CCAATCCTTCAGGTCCCCCGCCAAAT 75243 | |||| ||||| || ||||| |||| ||| || | || ||| | ||||| Sbjct 6800 TGAAGTACTTTTCATCATCTGTGAGCTTGTTGTTCCAGTCGTGGAGATCCTTGGACAAAT 6741 Query 75244 CAATCTCCTCGACCGTCCAGAA 75265 ||||||| ||| |||||||||| Sbjct 6740 CAATCTCTTCGGCCGTCCAGAA 6719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547167065209200