Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001675605.1_202016-06-23] 4,301 sequences; 42,962,175 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq3304 309 3e-79 seq3358 140 3e-28 >seq3304 Length=35661 Score = 309 bits (342), Expect = 3e-79 Identities = 1203/1882 (64%), Gaps = 26/1882 (1%) Strand=Plus/Plus Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164 || ||| || || ||||| || | | ||||| | | || || || || ||||| || Sbjct 2690 CTGGTCGACAGTGAACTGAATCGGCTGGGCGGCTGCCTGCGTCCGCAGGTAGTACATACC 2749 Query 22165 CGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG 22224 ||||| ||||| | |||||| || ||||| ||||| || | || || |||| Sbjct 2750 GGTCTTGAGACCAAGCTTCCAGCCGGTGAAATGCATCGAGGTGATCTTGCCCATGGTCGG 2809 Query 22225 CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGC 22284 | ||||| | |||| |||||| ||| || || || || || || || ||||| Sbjct 2810 GTCGCGCATGTGGATGTTGAGCGACTGGGACTGGTCAATGAAGGCACCACGGTCAGCGGC 2869 Query 22285 CATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTC 22344 ||| | | | ||||| ||| || ||||| || |||||||| || | | || | || Sbjct 2870 CATCTGAACGACGGTACGTTGCGAGATCTCCCAAACAGTCTTGTAGAGCTTCTTGGTATC 2929 Query 22345 TAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAAT 22404 || || | || |||||| ||| || | | ||||| || || || Sbjct 2930 CTCAGGGATGCTGGCAATGTTCTGGATGGAGCCTCCCTCGGCGATGATACGGTTCTTCAT 2989 Query 22405 CGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTG 22464 || ||||| ||| | || || ||| |||| || |||| || || || Sbjct 2990 GTCGTCTGACCACAGACCAAGCTCGACCAGATCCTTGAGCAACCAGGGGTTGACTACCTG 3049 Query 22465 AAACTCGCCGGACAAG-ACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATT 22523 |||||||||| |||| || |||||||||||||||||||| || | || || || | | Sbjct 3050 GAACTCGCCGG-CAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGCTCAAAGCACT 3108 Query 22524 CATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGT 22583 | ||||| || || || || | || ||| || ||||| || || | || | || Sbjct 3109 CGTTGTTGCCAAGGATTTGCGACGTGCTAGCTGTAGGCATGGGGGCAACGAGCAAGCTGT 3168 Query 22584 TTCTCAAGCCGTGCT--TTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGA 22641 | | | || || | |||| || || |||| || ||||||||| || || || Sbjct 3169 TGCGGACACCATGTTGCTTGATGTTGGCCTTGAGAGCGTC--CCAGTCCCAGAGGTCTGA 3226 Query 22642 CGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTC 22701 ||| | || || |||||| || || || | | ||| | | || || || Sbjct 3227 GGGCTTGACGTT---CCACATGTCATACTGGAGAATGCCCTGTGAAACAGGAGATCCCTC 3283 Query 22702 GTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTA 22761 ||| || ||| ||||| | | | || || | ||| || || || ||| Sbjct 3284 GTATGTCGAGTATGGACCCTGCTCCTCTGCCAGCTTGCAAGAGGCAGTCAGAGCAGCGTG 3343 Query 22762 ATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC----GGCGACGCTTTCGTACG 22817 || || ||||| ||||| |||||||| | || || || ||| ||| | | Sbjct 3344 GTAGATGGTCTCAAAGATCTTCTTGTTGAGATCACGAGCCTCAGGAGAC----TCGAAAG 3399 Query 22818 GCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGT 22877 ||| ||| | | ||| ||||| |||| ||| || ||||| | |||||| || | || Sbjct 3400 GCAGACGGAGTGCAAGGAAAGCGTCAGCCAGACCTTGGACGCCCAGACCGATAGGCCTGT 3459 Query 22878 TTTTCAGATTCGACACTTT--TGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCT 22935 || || | || |||||| | | || || | || ||||| | | Sbjct 3460 GGCGCATGTTG--CTGTTGCGTGCCTCCTGGACGGGGTAGTAGTTGACTTCGATGATCTT 3517 Query 22936 GTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCC 22995 ||| | ||| | || | || || | ||||||||||| | || Sbjct 3518 GTTGAGGTTGCGAACAACGACTTGAGTGACCTCATGGAGTTTCTCAAAGTCGTATTCACC 3577 Query 22996 CGATTG-TA--CAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTC 23052 | || || | || |||| | | || | || ||||| |||||||| || ||||| Sbjct 3578 CTTGTGGTAGTCGACGAACTGGGGCAGAGCCAGGGAAGCAAGGTTGCATACAGCAACCTC 3637 Query 23053 GTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAA 23112 ||| || | |||||| | ||| || || || || ||| | || || || | Sbjct 3638 GTCAGGGGCAGAGTACTCGATAATCTCCGTGCAGAGGTTGGAGCTGCGAATGGTACCAAG 3697 Query 23113 ATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGT 23172 || |||||||||| || || ||||| ||||||||| |||||| |||| | || || Sbjct 3698 GTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAACGGGTTACCAGT 3757 Query 23173 CTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTA 23232 ||| ||| | ||| | ||| | ||| | |||| || | | |||| || Sbjct 3758 CTCAGTCTGAGCCTCCAGGATGGAGTACCAAAGTTTCTGGGCCTTGAT-CGTCTTGCGAC 3816 Query 23233 CCTG-CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGG 23291 ||| || | | ||| ||||| | |||| || || || || ||||||| ||||| | Sbjct 3817 CCTTACCGGCCTGCTCATACTTCTCATACAGAGCCTCGAACTCTTCACCGTAGCAGTCCG 3876 Query 23292 CCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTC 23351 | ||||| || | | |||| ||||| | |||| || || |||||||| Sbjct 3877 CGAGGCCAGGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCCGTTTTTCTCAACGCGCT 3936 Query 23352 TCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTT 23411 |||| || ||||| || ||||| |||||| |||||| || ||||| || | |||||| | Sbjct 3937 TCATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGGCACGAATCTCCTCCT 3996 Query 23412 TGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGT 23471 | ||| |||||| | | || | || || || || || || ||||||||||| |||| Sbjct 3997 TTCCGTGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGCGTGCCACGGCTCAAGGT 4056 Query 23472 AAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGT 23531 | | |||||| || || || | ||| ||||| ||||| |||||||| || || ||||||| Sbjct 4057 AGATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCTGTGTTGT 4116 Query 23532 TGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCG 23591 || |||| | ||||| || || | ||||| || | |||| || || | | | Sbjct 4117 TGAACACACGCAGCATGGGAACAATGCCGTTCGAGGTGCCGTTGGTACCGGCGATATAGG 4176 Query 23592 AACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCA 23651 | || | || || | | || |||| || ||| || || || || || || |||| Sbjct 4177 AGCCAGTGGCACGGATGCGATGGACGTTGAGACCGATACCGCCAGCCATCTTGGAGATCA 4236 Query 23652 TCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCA 23711 | || || || || ||||||||||| ||||| |||||||| || || | | |||| Sbjct 4237 TGGCACAAGTCTTGAGGGTGTCGTAGATTCCCTCAATGCTGTCGTCCTTCATATCAACCA 4296 Query 23712 AGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGT 23771 ||| || || |||| || || | || || |||| ||| || |||||| ||||| Sbjct 4297 GGAAGCATGACGACAACTGAGCCTGCGGTGTGCCGGCGTTGAAAAGCGTCGGGGAGGCGT 4356 Query 23772 GCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTC 23831 | || ||| || | ||||| || ||||| || |||||| | ||||||| || | Sbjct 4357 GTGTGAAGAATTTGCTAGACATAAGGTTGTAGGTTTCGATGACTCGCTCAATGTTGTCAC 4416 Query 23832 CGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGT 23891 | ||||| | || || ||||| ||||||| || || |||||||| | ||| | Sbjct 4417 CCCAGATACCTACAGCAACACGCATGATCATGTGCTGTGGCCTCTCGACAATCTTGCCAT 4476 Query 23892 TAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGT 23951 | | || || || || || | | | || || || || ||||| | ||||| || | Sbjct 4477 TGAGCTTCAATAGGTAAGACCTCTCGAGAGTCTTGAAGCCGAAATATTGGTAGTTGAAAT 4536 Query 23952 CACGATCGTGCACTATGGCCGA 23973 |||| |||| || || || || Sbjct 4537 CACGGTCGTAGACAATAGCTGA 4558 >seq3358 Length=30968 Score = 140 bits (154), Expect = 3e-28 Identities = 305/455 (67%), Gaps = 4/455 (1%) Strand=Plus/Minus Query 57975 CTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTT 58034 || ||||| ||||| | |||||| ||||| ||||| || ||||| | || || Sbjct 2088 CTGATCGCTTTCGCTGTCGTCGAGGGTATCTTCTTCAGCGGTGCTTTTGCCTCCATCTTC 2029 Query 58035 TGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGC 58094 ||| | ||||| || ||||||||||| || ||||| || ||||||| | || ||||| Sbjct 2028 TGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTGACTTTCTCCAACGAGCTCATCTCGCGT 1969 Query 58095 GACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCG 58154 || |||||||| || || || ||||| || || ||| ||| | | | ||| | || Sbjct 1968 GATGAGGGTCTACACACCGACTTTGCCTGTCTCCTGTTCTCGCTCCTGAACAACAGGCCC 1909 Query 58155 ACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTC 58214 | ||| | ||| ||| | ||| || ||| ||| || | |||||| | Sbjct 1908 AACAAGGAGGTTGTGAAGGAGATTGTTGTCGATGCTGTCAAGATTGAGCAAGAGTTTCTT 1849 Query 58215 ACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATT 58274 || || || | || ||| | || || |||||| | ||||| |||||||| Sbjct 1848 ACGGAGGCGTTGCCCTGCGCCCTCCTGGGCATGAACGCCAACCTGATGAAGCAGTACATT 1789 Query 58275 GAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGA 58332 |||||||| || ||||||||| | ||| || || |||| ||| ||| | | Sbjct 1788 GAGTTTGTCGCTGACAGACTTCTTGTCGCCCTCGGAAACGAGAAGGTC--TACCGTGCCA 1731 Query 58333 AAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaa 58392 || || || ||||||||| | ||||| |||| |||||||| ||||| ||||| | Sbjct 1730 CCAACCCATTCGATTTTATGGAGAACATCTCACTCGGCGGCAAGACCAACTTCTTCGAGA 1671 Query 58393 aaaaaGTTAGCGAATATCAAAAATACGGCGTGATG 58427 || ||| |||| || |||||| ||| || ||| Sbjct 1670 AACGCGTTGGCGAGTACCAAAAAGCCGGTGTCATG 1636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445742434483920