Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001675605.1_202016-06-23] 4,301 sequences; 42,962,175 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq3196 100 6e-16 >seq3196 Length=48857 Score = 100 bits (110), Expect = 6e-16 Identities = 157/222 (71%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||| ||||| |||| ||||||||||| || |||| |||||||| || ||| Sbjct 10518 GGTGAGGACCTGTGCAACTGCACGTTCTCGCTCGCCTACGGTGCCAAGATTCTTCTCAAC 10459 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 |||| ||| ||||||||||| | || || ||||| ||| ||||| || | Sbjct 10458 CAGACCCATCTCCGTCTCAAGCGTGGCCAGCGTTACGGTCTTTGCGGCCCCAACGGTTCC 10399 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || ||| ||| || ||||||||||| |||| ||| | | ||| ||||| | ||| Sbjct 10398 GGAAAGTCCACCCTCATGCGCGCCATCAACAACGAGCAGGTCG-AGGGTTTCCCCAAGCA 10340 Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565 ||||| | ||| || | || ||||||||| | ||||| Sbjct 10339 GAGCGAGGTCAAGACCGTCTTCGTCGAGCACGACCTTGACTC 10298 Score = 91.5 bits (100), Expect = 3e-13 Identities = 113/152 (74%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731 |||| | ||||| ||| ||||| | ||||||| ||||| || ||||| ||||| | Sbjct 9146 CCAACTTTGGTCTCGACGCCGAGCTGGTTTCTCACTCGCGCATGCGTGGTCTGTCTGGTG 9087 Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTT 280790 | ||| ||||| | ||| | | || |||| |||||| | |||||| |||||||| Sbjct 9086 GACAGCGTGTCAAGGTCGTCCTTGCCGCCTGCTC-GTGGCAGCGTCCTCACTTGATCGTT 9028 Query 280791 CTCGACGAGCCTACCAACTATCTGGACCGCGA 280822 || || |||||||||||||| ||||||| || Sbjct 9027 CTTGATGAGCCTACCAACTACTTGGACCGTGA 8996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027780159447141