Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001675605.1_202016-06-23] 4,301 sequences; 42,962,175 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq3304 300 2e-76 >seq3304 Length=35661 Score = 300 bits (332), Expect = 2e-76 Identities = 981/1502 (65%), Gaps = 54/1502 (4%) Strand=Plus/Minus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 ||| ||||||| || |||||||| || || ||| | | ||| |||| || || |||||| Sbjct 4354 GCCTCCCCGACGCTTTTCAACGCCGGCACACCGCAGGCTCAGTTGTCGTCATGCTTCCTG 4295 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 | | |||| |||| ||| ||||| | ||||| ||||||| ||||| | Sbjct 4294 GTTGATATGAAGGACGACAGCATTGAGGGAATCTACGACACCCTCAAGACTTGTGCCATG 4235 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 ||||| || || || || ||||| ||| ||||| | | ||||||| || ||| Sbjct 4234 ATCTCCAAGATGGCTGGCGGTATCGGTCTCAACGTCCATCGCATCCGTGCCACTGGCTCC 4175 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 || ||| ||||||||| |||||||| |||||| | || || ||||| || || |||||| Sbjct 4174 TATATCGCCGGTACCAACGGCACCTCGAACGGCATTGTTCCCATGCTGCGTGTGTTCAAC 4115 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 ||| | || |||||||| ||||||||||| | | | ||| | || || |||| Sbjct 4114 AACACAGCTCGCTACGTCGACCAGGGTGGCAACAAGCGCCCCGGTGCCTTTGCCATCTAC 4055 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251 || ||||| |||||||| || || | ||| ||||||| | ||||||||||| || Sbjct 4054 CTTGAGCCGTGGCACGCAGATGTCTTCGAGTTCCTCGACCTAAGGAAGAACCACGGAAAG 3995 Query 94252 GATCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308 || ||||| | ||| | ||||| ||| |||||| ||| | || || || || ||| Sbjct 3994 GA---GGAGATTCGTGCCCGTGACCTGTTCCTCGCTCTTTGGATCCCTGATCTGTTCATG 3938 Query 94309 AAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTG 94368 || ||||| ||||||||| || ||||| | | || || || || || || || || Sbjct 3937 AAGCGCGTTGAGAAAAACGGCGACTGGACCTTGATGTGCCCGAACGAGTGCCCTGGCCTC 3878 Query 94369 TCCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGA-----AT-CGCAG 94422 | ||| || || |||||| || | |||| || || || |||| Sbjct 3877 GCGGAC-----TGCTACG----GTGAAGAGTTCGAGGCTCTGTATGAGAAGTATGAGCAG 3827 Query 94423 ---GGCAAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTA 94479 || |||| | ||| || | || ||| || ||| | ||| |||| | Sbjct 3826 GCCGGTAAGGGTCGCAAGACGATCAAGGCCCAGAAACTTTGGTACTCCATCCTGGAGGCT 3767 Query 94480 CAGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAA 94538 ||| ||||| |||| || | ||| ||| |||||| | ||| |||| |||| ||| Sbjct 3766 CAGACTGAGACTGGTAACCCGTTCATGCTGTACAAGGATCACTG-CAACCGCAAGAGCAA 3708 Query 94539 CCAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATAC 94598 |||| || |||| || || ||||| || || ||||| |||||| ||||||| | Sbjct 3707 CCAGAAGAACCTTGGTACCATTCGCAGCTCCAACCTCTGCACGGAGATTATCGAGTACTC 3648 Query 94599 TTCTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCG 94658 | | || |||||| ||||||| || ||||| | ||| | ||| || ||||| || Sbjct 3647 TGCCCCTGACGAGGTTGCTGTATGCAACCTTGCTTCCCTGGCTCTGCCCCAGTTCGT-CG 3589 Query 94659 AGATGCCTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAG 94718 | | || ||| | | | | ||| | ||| | || | || | ||| Sbjct 3588 A-CTACC-ACAAG------GGTGAATACGACTTTGAGAAACTCCATGAGGTCAC-TCAAG 3538 Query 94719 --GATGGTCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCG 94776 | || || ||||| |||| | | ||||| |||| ||||||||||| |||||| Sbjct 3537 TCGTTGTTC-GCAACCTCAACAAGATCATCGAAGTCAACTACTACCCCGTCCAGGAGGCA 3479 Query 94777 GAGAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCG 94836 ||| ||| || || |||| ||||| | |||||||| ||| | || ||||| Sbjct 3478 CGCAACAGCAACATGCGCCACAGGCCTATCGGTCTGGGCGTCCAAGGTCTGGCTGACGCT 3419 Query 94837 CTGGTGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATA 94896 | | | |||||||| | ||| ||| || || | | | || ||| || Sbjct 3418 TTCCTTGCACTCCGTCTGCCTTTCGAGTCTCCTGAGGCTCGTGATCTCAACAAGAAGATC 3359 Query 94897 TTCGAAAGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGC 94956 || || | ||| || ||| || ||| || | | ||| |||| ||| Sbjct 3358 TTTGAGACCATCTACCACGCTGCTCTGACTGCCTCTTGCAAGCTGG-CAGA--GGAGCAG 3302 Query 94957 GGGCCACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTC 95016 || ||| || | | | ||||| || | |||||||||| | |||| ||| | Sbjct 3301 GGTCCATACTCGACATACGAGGGATCTCCTGTTTCACAGGGCATTCTCCAGTATGACATG 3242 Query 95017 TGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAA 95076 ||| || |||||||| | || | |||||||| ||||| || | | | || Sbjct 3241 TGGAACGTCAAGCCCTCAGACCTCTGGGACTGGGACGCTCTCAAGGCCAACATCAAGCAA 3182 Query 95077 CACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATC 95136 || ||||| ||| |||| || ||||||||||| || || |||| |||| ||| Sbjct 3181 CATGGTGTCCGCAACAGCTTGCTCGTTGCCCCCATGCCTACAGCTAGCACGTCGCAAATC 3122 Query 95137 CTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTC 95196 |||||||||||||||| || || |||| || |||||| | ||| | | || ||||| Sbjct 3121 CTTGGCAACAACGAGTGCTTTGAGCCCTATACTTCCAACATTTACCAACGCCGTGTGCTT 3062 Query 95197 GCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTC--TCTGGGTG 95254 ||||| || |||| || ||||| | || ||| ||| ||| || ||| Sbjct 3061 GCCGGCGAGTTCCAGGTAGTCAACCCCTGGTTGCTCAAGGATCTG--GTCGAGCTTGGTC 3004 Query 95255 TGTGGGGTGACAAGGTCAAGAACC--AACTGCTACGCGCCAACGGCTCCGTCCAGAACAT 95312 ||||| ||| | | ||||||| | | | || | | |||||| |||||||||| Sbjct 3003 TGTGGTCAGACGACATGAAGAACCGTATCATCGCCGAGGGA--GGCTCCATCCAGAACAT 2946 Query 95313 --CCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAG 95370 || || || || ||||| | |||| |||||||||||| || ||||||||| |||| Sbjct 2945 TGCCAGC--ATCCCTGAGGATACCAAGAAGCTCTACAAGACTGTTTGGGAGATCTCGCAA 2888 Query 95371 CG 95372 || Sbjct 2887 CG 2886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494696602443960