Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001675605.1_202016-06-23] 4,301 sequences; 42,962,175 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq3304 168 1e-36 seq3358 147 3e-30 >seq3304 Length=35661 Score = 168 bits (186), Expect = 1e-36 Identities = 455/681 (67%), Gaps = 14/681 (2%) Strand=Plus/Plus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCT-CAGATAGTACATGC 203897 || ||| || ||||||||||| | | |||| | ||||| || ||| |||||||| | Sbjct 2690 CTGGTCGACAGTGAACTGAATCGGCTGGGCGGCTG-CCTGCGTCCGCAGGTAGTACATAC 2748 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957 ||||||| || || || ||| ||| | ||||| || | | |||| || | | | Sbjct 2749 CGGTCTTGAGACCAAGCTTCCAGCCGGTGAAATGCATCGAGGTGATCTTGCCCATGGTCG 2808 Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCG 204016 ||||| |||||| ||||| || |||||| ||||| ||||| ||| || || || ||| Sbjct 2809 GGTCGCGCATGTGGATGTTGAGCGACTGGGACTGGTCAATGAA-GGCACCACGGTCAGCG 2867 Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGGT 204075 ||||| | | | ||| ||||| |||||||| || |||||| | | | ||| |||| Sbjct 2868 GCCATCTGAACGACGGTACGTTGCGAGATCTCCCAAACAGTCTTGTAGAGCTTCT-TGGT 2926 Query 204076 GTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCATCC 204134 | | ||| | || | | || ||| || ||||| ||||| || | | || Sbjct 2927 ATCCTCAGGGATG-CTGGCAATGTTCTGGATGGAGCCTCCCTCGGCGATGATACGGTTCT 2985 Query 204135 TCGTCTCCTCCCCCCACATGCCCAACCT-GATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193 || | || || ||||| | |||| || || ||| ||| | || |||||||| Sbjct 2986 TCATGTCGTCTGACCACA-GACCAAGCTCGACCAGATCCTTGAGCAACCAGGGGTTGACT 3044 Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253 | ||| || || |||| ||||| | || | | | |||| || | || || || Sbjct 3045 ACCTGGAACTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGCTCAAAG 3104 Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313 |||||||||||| | || || | ||||| || || |||||||| || | ||||| | Sbjct 3105 CACTCGTTGTTGCCAAGGATTTGCGACGTGCTAGCTGTAGGCATGGGGGCAACGAGCAAG 3164 Query 204314 GAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCA 204373 |||||| ||||| | || | || || ||| |||| | |||||| || | Sbjct 3165 CTGTTGCGGACACCATGTTGCTTGATGTTGGCCTTGAGAGCGTCCCAGTCC--CAGAGGT 3222 Query 204374 CTG--GGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCT 204431 ||| || || ||| ||||||||| |||| | ||||| || || || |||| Sbjct 3223 CTGAGGGCTTGACGTTCCACATGTCATACTGGAGAATGCCCTGTGAAACAGGAGATCCCT 3282 Query 204432 TGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGAT 204491 ||| |||| || || | ||| |||||||||||||| ||||| | || || | Sbjct 3283 CGTATGTCGAGTATGGACCCTGCTCCTCTGCCAGCTTGCAAGAGGCAGTCAGAGCAGCGT 3342 Query 204492 AGTACATGGTCTCAAAGATCT 204512 ||| |||||||||||||||| Sbjct 3343 GGTAGATGGTCTCAAAGATCT 3363 Score = 107 bits (118), Expect = 3e-18 Identities = 438/678 (65%), Gaps = 28/678 (4%) Strand=Plus/Plus Query 204931 CTGCTGGTTAGACTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTC 204990 || |||||| ||||||||| ||| |||||||||| ||||||||| | || |||| Sbjct 3701 CTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAACGGGTTACCAGTCTC 3760 Query 204991 CATCTGAGATCGCAGAATGTGGGTCCACAATTCGCGAGCCTCCA----CTTGCTTCACGT 205046 |||||| ||| ||| | ||| | || | |||| | ||||| | | | Sbjct 3761 AGTCTGAGCCTCCAGGATGGAGTACCAAAGTTTCTGGGCCTTGATCGTCTTGCGACCCTT 3820 Query 205047 ACATCCCTTGAGACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCA 205106 || ||| ||| || || ||||| ||| | || || |||||| |||| Sbjct 3821 ACCGGCCTG----CTCATACTTCTCATACAGAGCCTCGAACTCTTCACCGTAGCAGTCCG 3876 Query 205107 TCAGCCCTGGACATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTC---ACCC 205163 || || || || | || || ||||||| | ||| | ||| |||| || | Sbjct 3877 CGAGGCCAGGGCACTCGTTCGGGCACATCAAGGTCCAG---TCGCCGTTTTTCTCAACGC 3933 Query 205164 TCTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGT 205223 || ||| ||||| || |||||| || || ||||| |||||||| | ||| | | Sbjct 3934 GCTTCATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGGCACGAATCTCCT 3993 Query 205224 CGTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCT 205282 | | ||| ||||||| | | ||| || || || | | || |||||||||||||| Sbjct 3994 CCTTTCCGTGGTTCTTCCTTAGGTCGAGG-AACTCGAAGACATCTGCGTGCCACGGCTCA 4052 Query 205283 AACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATC 205342 | | | ||| | || || || | |||||| ||||||||||| || ||||| | Sbjct 4053 AGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCTGTG 4112 Query 205343 GCGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATG 205402 |||||| || |||||||| || || | ||||| | ||| ||||| || | | ||| Sbjct 4113 TTGTTGAACACACGCAGCATGGGAACAATGCCGTTCGAGGTGCCGTTGGTACCGGCGATA 4172 Query 205403 GCCGAGCCTTCAGCCCTCACGTTGGAGATGGCCG----CGCCAATCCCGCCAGAACACTT 205458 |||| ||| |||| | ||||| || || || ||||||| ||| Sbjct 4173 TAGGAGC---CAG-TGGCACGGATGCGATGGACGTTGAGACCGATACCGCCAGCCATCTT 4228 Query 205459 GGCGATCTGGGCGC-ACTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCA 205517 || |||| ||| | | ||||| || ||| |||||| || | ||| |||||| || Sbjct 4229 GGAGATCATGGCACAAGTCTTG-AGGGTGTCGTAGATTCCCTCAATGCTGTCGTCCTTCA 4287 Query 205518 GTGTC-ACCAGATAGCACGAAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTG 205576 | || ||||| |||| || | || || || ||||| |||| ||| ||||| Sbjct 4288 -TATCAACCAGGAAGCATGACGACAACTGAGCCTGCGGTGTGCCGGCGTTGAAAAGCGTC 4346 Query 205577 GGGCTGGCGTGGCTGAAG 205594 ||| |||||| ||||| Sbjct 4347 GGGGAGGCGTGTGTGAAG 4364 >seq3358 Length=30968 Score = 147 bits (162), Expect = 3e-30 Identities = 333/498 (67%), Gaps = 11/498 (2%) Strand=Plus/Plus Query 159650 TTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTTC 159709 |||||||| |||||||||||||| | | || || ||||| || |||||||||| Sbjct 1670 TTCTCGAAGAAGTTGGTCTTGCCGCCGAGTGAGATGTTCTCCATAAAATCGAATGGGTTG 1729 Query 159710 TTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTCG 159769 | | | ||| |||| |||||| || | || | ||||| || ||||| || Sbjct 1730 GTGGCACGGTAGACCTTCTCGTTTCCGAGGGCGACAAGAAGTCTGTCAGCGACAAACTCA 1789 Query 159770 ATGTAGCTACA-CATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828 ||||| || | |||| | | ||| || ||||| || ||| | ||| |||| Sbjct 1790 ATGTA-CTGCTTCATCAGGTTGGCGTTCATGCCCAGGAGGGCGCAGGGCAACGCCTCCGT 1848 Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTACCC 159888 |||||||| | |||||||| ||| || ||| ||||||| | ||| || | Sbjct 1849 AAGAAACTCTTGCTCAATCTTGACAGCATCGACAACAATCTCCTTCACAACCTCCTTGTT 1908 Query 159889 CGGCTTGCCCAAAATGT---GGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCC 159945 ||| || ||| || | |||||||| || ||||||||| ||| || || Sbjct 1909 GGGCCTGT------TGTTCAGGAGCGAGAACAGGAGACAGGCAAAGTCGGTGTGTAGACC 1962 Query 159946 CTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTT 160005 ||| || || ||||||| ||||||||| | | || || ||||| | |||||| || Sbjct 1963 CTCATCACGCGAGATGAGCTCGTTGGAGAAAGTCAGACCAGGCATCAGGCCACGCTTCTT 2022 Query 160006 GAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGC 160065 |||||| || |||| |||||||||||||| || ||||| ||||| ||| | || || || Sbjct 2023 GAGCCAGAAGATGGAGGCAAAAGCACCGCTGAAGAAGATACCCTCGACGACAGCGAAAGC 2082 Query 160066 CACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGC 160125 | || | | |||| | | || |||| | ||||||| ||||| || || Sbjct 2083 GATCAGGCGCGTGGCAAAGGTTGACTTCTTGTCGGTGATCCACCTCAGAGCCCAGTCGGC 2142 Query 160126 CTTCTTTGCGATGCACGG 160143 |||||| |||||| || Sbjct 2143 CTTCTTGCGGATGCAGGG 2160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795112450468560