Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001675605.1_202016-06-23] 4,301 sequences; 42,962,175 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq3304 199 5e-46 seq3358 104 3e-17 seq3143 87.8 2e-12 >seq3304 Length=35661 Score = 199 bits (220), Expect = 5e-46 Identities = 1122/1775 (63%), Gaps = 41/1775 (2%) Strand=Plus/Minus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 |||||| ||||| ||||||| || || | |||||| || || | ||||| || Sbjct 4456 CCACAGCACATGATCATGCGTGTTGCTGTAGGTATCTGGGGTGACAACATTGAGCGAGTC 4397 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731 | || || ||| || ||||| | | |||| ||||| | || || || ||| Sbjct 4396 ATCGAAACCTACAACCTTATGTCTAGCAAATTCTTCACACACGCCTCCCCGACGCTTTTC 4337 Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791 ||||| || ||||| | || |||| || ||||| ||| | ||||| || Sbjct 4336 AACGCCGGCACACCGCAGGCTCAGTTGTCGTCATGCTTCCTGGTTGATATGAAGGACGAC 4277 Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851 || | || || |||| ||| |||| |||||| ||||| ||| |||||| Sbjct 4276 AGCATTGAGGGAATCTACGACACCCTCAAGACTTGTGCCATGATCTCCAAGATGGCTGGC 4217 Query 111852 GGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA-GGTACAA 111909 |||||||| | || ||||| || | |||| | ||| ||| | | ||||| | Sbjct 4216 GGTATCGGTCTCAACGTCCATCGCATCCGTGCCACT--GGCTCCTATATCGCCGGTACCA 4159 Query 111910 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 111969 | || || | || ||| |||| ||||| || || || ||| |||||| ||||| | Sbjct 4158 ACGGCACCTCGAACGGCATTGTTCCCATGCTGCGTGTGTTCAACAACACAGCTCGCTACG 4099 Query 111970 TAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 112023 | |||| | ||| ||| | | || | | || |||| |||||||| |||| Sbjct 4098 TCGACCAGGGTGGCAACAAGCGCCCC---GGTGCCTTTGCCATCTACCTTGAGCCGTGGC 4042 Query 112024 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGT 112083 |||| ||| || | |||||||| || | | ||||| || | |||||| || Sbjct 4041 ACGCAGATGTCTTCGAGTTCCTCGACCTAAGGAAGAACCACGGAAAGGAGGAGATTCGTG 3982 Query 112084 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 112143 ||| || || ||| |||||| ||||| || ||||| ||||||||| | |||||| | | Sbjct 3981 CCCGTGACCTGTTCCTCGCTCTTTGGATCCCTGATCTGTTCATGAAGCGCGTTGAGAAAA 3922 Query 112144 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTG 112203 ||| | ||| | | | || || || || || || ||| | || | |||| Sbjct 3921 ACGGCGACTGGACCTTGATGTGCCCGAACGAGTGCCCTGGCCTCGCGGACTGCTACGGTG 3862 Query 112204 AGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC--GACGGT 112261 | ||||| || || || || ||||| ||| | | || || | | || |||| | Sbjct 3861 AAGAGTTCGAGGCTCTGTATGAGAAGTATGAGCAGGCCGGTAAGG-GTC-GCAAGACGAT 3804 Query 112262 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 112320 | || | || | ||| | | || || || |||| || |||||||||| || | Sbjct 3803 -CAAGGCCCAGAAACTTTGGTACTCCATCCTGGAGGCTCAGACTGAGACTGGTAACCCGT 3745 Query 112321 ATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 112380 ||||| ||||| || ||| |||| ||||| || || ||||| | ||| || Sbjct 3744 TCATGCTGTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTTGGTACCATTC 3685 Query 112381 AGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 112440 || ||||||||||| || || || | || | | | | || ||| ||||| | Sbjct 3684 GCAGCTCCAACCTCTGCACGGAGATTATCGAGTACTCTGCCCCTGACGAGGTTGCTGTAT 3625 Query 112441 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGAT--CCAGAGACAAAGACATTTGA 112498 | ||||| || || | ||||| ||| ||| || || ||| | | || || || Sbjct 3624 GCAACCTTGCTTCCCTGGCTCTGCCCCAGTTCGTCGACTACCACA-AGGGTGA-ATACGA 3567 Query 112499 TTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGA 112558 | ||| |||||||| || || || || || ||||| |||| | || || Sbjct 3566 CTTTGAGAAACTCCATGAGGTCACTCAAGTCGTTGTTCGCAACCTCAACAAGATCATCGA 3507 Query 112559 TAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGG 112618 || | |||||||| || || || || || ||| | ||| | || || || Sbjct 3506 AGTCAACTACTACCCCGTCCAGGAGGCACGCAACAGCAACATGCGCCACAGGCCTATCGG 3447 Query 112619 TCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT---CTTTGTCGCCACGCATTTGATTC 112675 ||| || ||||||||||| || || | ||| || || ||| | | || || || Sbjct 3446 TCTGGGCGTCCAAGGTCTGGCTGACGCTTTCCTTGCACTCCGTCTGC---CTTTCGAGTC 3390 Query 112676 CGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGA 112735 || || || |||| | || |||||||| || || ||||| ||||| Sbjct 3389 TCCTGAGGCTCGTGATCTCAACAAGAAGATCTTTGAGACCATCTACCACGCTGCTCTGAC 3330 Query 112736 GGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGC 112795 || || || ||||||||| | |||||||| || | ||||| ||||| | Sbjct 3329 TGCCTCTTGCAAGCTGGCAGAGGAGCAGGGTCCATACTCGACATACGAGGGATCTCCTGT 3270 Query 112796 TTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTG 112855 |||||| || | || || | ||| |||||| | | || || | || ||||| Sbjct 3269 TTCACAGGGCATTCTCCAGTATGACATGTGGAACGTCAAGCCCTCAGACCTCTGGGACTG 3210 Query 112856 GGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACC 112915 |||||||||||||| ||||||| | | ||| | || ||||| | | | || || Sbjct 3209 GGACGCTCTCAAGGCCAACATCAAGCAACATGGTGTCCGCAACAGCTTGCTCGTTGCCCC 3150 Query 112916 AATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACAC 112975 ||||| ||||| ||| | |||||| | || || || || |||||||| ||||| || Sbjct 3149 CATGCCTACAGCTAGCACGTCGCAAATCCTTGGCAACAACGAGTGCTTTGAGCCCTATAC 3090 Query 112976 GACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA---CAAGCA 113032 | ||||| || | | | || || || ||||| | | ||||| | | Sbjct 3089 TTCCAACATTTACCAACGCCGTGTGCTTGCCGGCGAGTTCCAGGTAGTCAACCCCTGGTT 3030 Query 113033 TCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGT 113092 ||| |||| || ||| ||||||| ||||| | || |||||| | | || | Sbjct 3029 GCTCAAGGAT---CTGGTCGAGCTTGGTCTGTGGTCAGACGACATGAAGAACCGTATCAT 2973 Query 113093 GAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTA 113152 | ||| || ||||| || || |||| || || || || | |||||| | || Sbjct 2972 CGCCGAGGGAGGCTCCATCCAGAACATTGCCAGCATCCCTGAGGATACCAAGAAGCTCTA 2913 Query 113153 CCGCACAGTTTGGGAAATCAAGATGAAGGA-TGTCATTGACATGGCCGCAGATCGTGGTC 113211 | || |||||||| ||| | | | | ||| || | |||||||| || |||||| Sbjct 2912 CAAGACTGTTTGGGAGATCTCG-CAACGTACCGTCGTTCAGATGGCCGCTGACCGTGGTG 2854 Query 113212 GCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGATGTCCAA 113269 ||||||||| | |||| ||| | || | |||| || || ||| ||| Sbjct 2853 CCTTCATTGACC--AGTCCCAGTCGCTCAACATCCACATGCGCGACCCGACCATGGGCAA 2796 Query 113270 GCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCT 113329 | || | || ||||| | | | |||||| |||||||| || || ||||| ||||| Sbjct 2795 GATCACCTCGATGCATTTCACCGGCTGGAAGCTTGGTCTCAAGACCGGTATGTACTACCT 2736 Query 113330 CCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCA 113364 || | ||||| || | || |||||||||| Sbjct 2735 GCGGACGCAGGCAGCCGCCCAGCCGATTCAGTTCA 2701 >seq3358 Length=30968 Score = 104 bits (114), Expect = 3e-17 Identities = 161/226 (71%), Gaps = 8/226 (4%) Strand=Plus/Minus Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGTC 102166 ||| || || || | ||||| || || |||||| ||| |||| | || | ||||| Sbjct 2164 AGTCCCCTGCATCCGCAAGAAGGCCGACTGGGCTCTGAGGTGGATCACCGACAAGAAGTC 2105 Query 102167 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGT-GTTGAGGGTATCTTCTTCTCTG 102225 ||||||| ||| || |||| || || ||| || ||||||||||||||| | Sbjct 2104 AA---CCTTTGCCACGCGCCTGATCGCTTTCGC-TGTCGTCGAGGGTATCTTCTTCAGCG 2049 Query 102226 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 102285 || | || | | || | |||||||||||||| || || ||||| ||||| |||| Sbjct 2048 GTGCTTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTGACTTTCT 1989 Query 102286 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 |||||||||| ||||| ||||| ||||| || ||| || ||||| Sbjct 1988 CCAACGAGCTCATCTCGCGTGATGAGGGTCTACACACCGACTTTGC 1943 >seq3143 Length=56862 Score = 87.8 bits (96), Expect = 2e-12 Identities = 268/411 (65%), Gaps = 9/411 (2%) Strand=Plus/Plus Query 15975 AAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 16034 ||||| |||||||| ||||||| |||||| | || || || || || || || | | Sbjct 25660 AAACCGTCCATCTCGGTCAAAATCTGGTTCAGTGTGGCCTCGCGCTCGTCGTT-GCCGCC 25718 Query 16035 ATACC----ACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGAT 16090 | | | ||| | || ||| || | ||||| || || || ||||||| ||| Sbjct 25719 AAAGCGGGCACCCGAGTCACGGGCCTTGCCGATAGCATCGATTTCGTCGATGAAGATGAT 25778 Query 16091 GCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACC 16150 ||| || | || ||| || | | || || || || ||||| || || ||||| Sbjct 25779 GCAAGGAGCGTGTTTGCGCGCCTCCTTGAACAGGTCTCGCACACGAGACGCACCGACACC 25838 Query 16151 AACAAACATCTCCACAAAGTTTG--CGGCGGAACATTGGATGAAGGGGACATTAGATTCA 16208 |||||||| || || || | || | | || | || |||||| || || ||| Sbjct 25839 GACAAACATTTCGACGAACTCTGAACCACTGACGCT--GAAGAAGGGCACGCCCGACTCA 25896 Query 16209 CCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCA 16268 || || | || ||| | ||| ||||||||||| ||||| ||| | || | |||| Sbjct 25897 CCGGCCGTAGCCTTGGCCAAAAGCGTCTTACCCGTTCCTGGAGGACCGGACAGAATGGCA 25956 Query 16269 CCTCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACA 16328 || ||||||||||||||||| | || | | |||| ||| ||| || || |||| Sbjct 25957 CCACGTGGAATCTTGGCGCCCAACCGAACGAACTTCTCCGGTGTCTTCAGGAAGCTCACA 26016 Query 16329 ATCTCTTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATCGGTAAAC 16379 | || | | |||| ||||| ||||| || | || |||| |||| Sbjct 26017 AATTCGACAATTTCAAGCTTGGCCTCGTCAGCACCGGCTACGTCGGCAAAC 26067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620709027336720