Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001675605.1_202016-06-23] 4,301 sequences; 42,962,175 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq3189 158 1e-33 seq3304 149 6e-31 seq2954 104 2e-17 >seq3189 Length=50234 Score = 158 bits (174), Expect = 1e-33 Identities = 161/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || ||||| ||||| ||||| || || |||||||| ||| | | Sbjct 4843 ATGCAAATCTTCGTCAAGACGCTTACCGGCAAAACCATCACACTCGAAGTTGAATCTTCA 4902 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || ||| |||||| |||||||| || || || || || || ||| Sbjct 4903 GACACAATCGACAACGTCAAATCAAAGATTCAAGACAAGGAGGGTATCCCGCCTGACCAA 4962 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||||||||||||||| || || |||||||||||| ||| | |||| ||||| || Sbjct 4963 CAACGTTTGATCTTTGCGGGCAAGCAGCTGGAGGATGGACGAACCCTGTCTGATTACAAT 5022 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||||| ||||| ||||| || ||| | ||| Sbjct 5023 ATTCAGAAGGAGTCGACTCTGCACCTTGTG 5052 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || || || || || ||| | || || || | | Sbjct 4615 ATGCAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACGTTGGAGGTCGAGTCTTCA 4674 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| |||||||||||||| || || || ||||| || ||| Sbjct 4675 GACACGATTGACAATGTTAAATCCAAGATCCAAGACAAGGAGGGTATTCCTCCGGACCAA 4734 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| || || || ||| |||||||| | | |||| || || ||| Sbjct 4735 CAGCGACTGATCTTCGCTGGAAAGCAGTTGGAGGATGGACGCACGCTGTCCGACTACAAC 4794 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || ||||||||||| || || |||||||| |||| |||| || || Sbjct 4795 ATCCAAAAGGAATCTACTCTGCACTTGGTCCTGCGTCTGCGTGGTGG 4841 >seq3304 Length=35661 Score = 149 bits (164), Expect = 6e-31 Identities = 957/1524 (63%), Gaps = 56/1524 (4%) Strand=Plus/Plus Query 138508 ACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAAC 138567 ||||| || || ||||| | || || || |||||||||| || | |||||||| Sbjct 3045 ACCTGGAACTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGCTCAAAG 3104 Query 138568 GATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGA 138627 | |||||||| || || || || | |||| | || || |||||| || || | | Sbjct 3105 CACTCGTTGTTGCCAAGGATTTGCGACGTGCTAGCTGTAGGCATGGGGGCAACGAGCAAG 3164 Query 138628 GAATTCCGTAAACCGTGAAGCTTGATTCGTT--CCTTGAGCGACGACCAGTCCCACAAAT 138685 || || | ||| || ||||||| ||| ||||||| | ||||||||| | | Sbjct 3165 CTGTTGCGGACACCATGTTGCTTGAT--GTTGGCCTTGAGAGCGTCCCAGTCCCAGAGGT 3222 Query 138686 CGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCC----AAACTTGCGGGACTG 138741 | || || ||||||||| || ||||| | || ||| |||| ||| Sbjct 3223 CTGAGGGCTTGACGTTCCACATGTCATACTGGAGAATGCCCTGTGAAACA----GGAGAT 3278 Query 138742 CCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCA 138801 || ||||| | |||| ||| ||| | |||| || | || || ||| Sbjct 3279 CCCTCGTATGTCGAGTATGGACCCTGCTCCTCTGCCAGCTTGCAAGAGGCAGTCAGAGCA 3338 Query 138802 CCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTAC 138861 | | ||| || || || |||| || ||||| || ||||| | |||| | Sbjct 3339 GCGTGGTAGATGGTCTCAAAGATCTTCTTGTTGAGATCACGAGCCTCAGGAGACTCGAAA 3398 Query 138862 GGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGA 138921 |||| ||||| ||| ||||| ||||| ||||| ||||||| |||| ||| | Sbjct 3399 GGCAGACGGAGTGCAAGGAAAGCGTCAGCCAGACCTTGGACGCCCAGACCGATAGGCCTG 3458 Query 138922 TGGCGCAGATTTGACGCTTTTGCG-GCTTC---GATAGGATAATAGTTTACATCGATGAT 138977 ||||||| || ||| ||||| || || || || || ||||| || |||||||| Sbjct 3459 TGGCGCATGTT----GCTGTTGCGTGCCTCCTGGACGGGGTAGTAGTTGACTTCGATGAT 3514 Query 138978 TTTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGT 139037 ||||| | || || || || || | ||| | | | | ||||| |||||| Sbjct 3515 CTTGTTGAGGTTGCGAACAACGACTTGAGTGACCTCATGGAGTTTCTCAAAGTCGTATTC 3574 Query 139038 GCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCA 139097 ||| || || |||||||| | | | || || || || | |||||| Sbjct 3575 ACCCTTGTGGTAGTCGACGAACTGGGGCA-------GAGCCAGG--GAAGCAAGGTTGCA 3625 Query 139098 CACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTT 139157 || || || ||||| ||| | ||| |||| ||| || | || | || | Sbjct 3626 TACAGCAACCTCGTCAGGGGCAGAGTACTCGATAATCTCCGTGCAGAGGTTGGAGCTGCG 3685 Query 139158 GATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATA 139217 || ||||| | || | || ||||| || ||||| || ||| ||||| ||||| | Sbjct 3686 AATGGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAA 3745 Query 139218 CGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAG--CTTGT 139275 ||| | ||||| || || | ||| | ||| | | | |||| || | |||| Sbjct 3746 CGGGTTACCAGTCTCAGTCTGAGCCTCCAGGATGGAGTACCA-AAGTTTCTGGGCCTTG- 3803 Query 139276 AT----TTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCG 139331 || ||| | | || || | |||| ||||| || || || | ||||| Sbjct 3804 ATCGTCTTGCGACCCTTAC----CGGCCTGCTCATACTTCTCATACAGAGCCTCGAACTC 3859 Query 139332 TTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCC 139391 |||||||||| ||| | || | | |||| || || ||||| | | ||| |||| Sbjct 3860 TTCACCGTAGCAGTCCGCGAGGCCAGGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCC 3919 Query 139392 GTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCG 139451 ||| || |||||| ||||||||||||| || ||||| | ||||| | || || || Sbjct 3920 GTTTTTCTCAACGCGCTTCATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACG 3979 Query 139452 CGCCTTCTTATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAGC 139511 || | || ||| || ||| | | || ||||| || || || || || Sbjct 3980 GGCACGAATCTCCTCCTTTCCGTGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGC 4039 Query 139512 GTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTTG---CCACCTTGATCGAC 139568 |||||| || || || |||||||| | || || || ||| ||||| || ||||| Sbjct 4040 GTGCCACGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGAC 4099 Query 139569 GTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTT 139628 || || | | || ||||| || |||| ||| || | | ||| ||| || ||||| Sbjct 4100 GTAGCGAGCTGTGTTGTTGAACACACGCAGCATGGGAACAATGCCGTTCGAGGTGCCGTT 4159 Query 139629 GGTGCTACGG----ATGGGA-CTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGATT 139683 ||| | ||| || ||| | || || |||| | ||| || |||| ||||| Sbjct 4160 GGTAC--CGGCGATATAGGAGCCAGTG---GCACGGATGCGATGGACGTTGAGACCGATA 4214 Query 139684 CCGCCGCCAAATTTGGATATTAAAACGCAA-TCGCGTAATGTCTCGTATATACCTCTTAT 139742 ||||| | | ||||| || | | ||| || | | || ||||| || || || Sbjct 4215 CCGCCAGCCATCTTGGAGATCATGGCACAAGTCTTG-AGGGTGTCGTAGATTCCCTCAAT 4273 Query 139743 GCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGC 139802 ||||||||||| ||| ||||| ||||||||||| | || | | |||||||| Sbjct 4274 GCTGTCGTCCTTCATATCAACCAGGAAGCATGACGACAACTGAGCCTGCGGTGTGCCGGC 4333 Query 139803 TGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTC 139862 || || || || ||||| ||||| | || | ||||| | | ||| ||||| Sbjct 4334 GTTGAAAAGCGTCGGGGAGGCGTGTGTGAAGAATTTGCTAGACATAAGGTTGTAGGTTTC 4393 Query 139863 GATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTG 139922 |||| | | | |||| | || |||||| |||| || ||||| | ||| || || Sbjct 4394 GATGACTCGCTCAATGTTGTCACCCCAGATACCTACAGCAACACGCATGATCATGTGCTG 4453 Query 139923 GATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATAACCGTTCTCTAGGGTCTTGTA 139982 || ||| | | | ||| | || || || ||| |||| || |||||| | Sbjct 4454 TGGCCTCTCGACAATCTTGCCATTGAGCTTCAATAGGTAAGACCTCTCGAGAGTCTTGAA 4513 Query 139983 GCCAAAGTACCTATAGTTGAAATC 140006 ||| || || ||||||||||| Sbjct 4514 GCCGAAATATTGGTAGTTGAAATC 4537 >seq2954 Length=190517 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || ||||| || || || || || | | | Sbjct 87407 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 87466 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 87467 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 87526 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||||||||| || ||||| ||||| || | | |||| || || ||| Sbjct 87527 CAGCGCTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCAGGACCCTGTCCGACTACAAC 87586 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 || || ||||| || || ||| | ||| |||| |||| || || || Sbjct 87587 ATCCAGAAGGAGAGCACCCTCCACCTCGTGCTGCGTCTGCGTGGTGGTGG 87636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449873412380280