Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001675605.1_202016-06-23] 4,301 sequences; 42,962,175 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq3304 354 9e-93 seq3189 158 1e-33 seq2954 154 2e-32 seq2996 131 2e-25 seq3358 82.4 9e-11 >seq3304 Length=35661 Score = 354 bits (392), Expect = 9e-93 Identities = 1159/1783 (65%), Gaps = 47/1783 (3%) Strand=Plus/Plus Query 80005 ACCGTCACCTGAATTGGCTTGGCCTTTGCCCGCGTCCGCAGATAGTACATGCCCGTCTTG 80064 || || | |||||| |||| ||| |||| |||||||||| |||||||| || |||||| Sbjct 2697 ACAGTGAACTGAATCGGCTGGGCGGCTGCCTGCGTCCGCAGGTAGTACATACCGGTCTTG 2756 Query 80065 AGGCCCTTCTTCCAGCCGTACAGGTGCATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCC 80124 || || |||||||||| | ||||| || ||| ||| | | || |||| | Sbjct 2757 AGACCAAGCTTCCAGCCGGTGAAATGCATCGAGGTGATCTTGCCCATGGTCGGGTCGCGC 2816 Query 80125 ATGAAGATGTTCAGAGACTGAGACTGACAGATGAAAGCCCCACGATCTGCCGCCATTTCA 80184 ||| |||||| || ||||| ||||| ||||| || ||||| || || ||||| | | Sbjct 2817 ATGTGGATGTTGAGCGACTGGGACTGGTCAATGAAGGCACCACGGTCAGCGGCCATCTGA 2876 Query 80185 ATAATTGACTTTTGTGGAATTTCCCATACTGTACGATACACCTTACGAAGCTCCTCTGGA 80244 | | | ||| | || ||||| || || || | ||| ||||| || Sbjct 2877 ACGACGGTACGTTGCGAGATCTCCCAAACAGTCTTGTAGAGCTTCTTGGTATCCTCAGGG 2936 Query 80245 ATGT---CCAGATTTTGCACACTGCCACCGTCCTTTACAATTTGATTTTTCAATTCAGAC 80301 ||| | | || || | ||| || || | || | || |||| || Sbjct 2937 ATGCTGGCAATGTTCTGGATGGAGCCTCCCTCGGCGATGATACGGTTCTTCATGTCGTCT 2996 Query 80302 GTCCAGACACCAAGCTTGTGCAGATCTTTCA-CAAG--GTGCTTGTTAATCATGACAAAC 80358 | ||| | |||||||| | |||||| || | ||| | | ||| | | || || Sbjct 2997 GACCACAGACCAAGCTCGACCAGATCCTTGAGCAACCAGGGGTTGACTACCTGGA---AC 3053 Query 80359 TCTCCCGCGAGGGTGCGACGCAGATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCGTTG 80418 || || || || || || | || | ||| | ||| || |||||||| ||||||| Sbjct 3054 TCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGCTCAAAGCACTCGTTG 3113 Query 80419 TTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATCGGGCCGACCAACAGTGAATTCCGC 80478 || || ||||| || | |||||| || || ||||| ||| | || | || || || Sbjct 3114 TTGCCAAGGATTTGCGACGTGCTAGCTGTAGGCATGGGGGCAACGAGCAAGCTGTTGCGG 3173 Query 80479 AGGCCGTGCTTCTTGATAT---CCTCGCGCAAATCTGA---CCAAAAATCAACCCCAACG 80532 | || || | |||||| | ||| | | || | ||| | || | | Sbjct 3174 ACACCATGTTGCTTGATGTTGGCCTTGAGAGCGTCCCAGTCCCAGAGGTCTG----AGGG 3229 Query 80533 CTGTGACC--CCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACG 80590 || |||| ||||||||| | ||| | ||||||| || | ||||| ||| || | | Sbjct 3230 CT-TGACGTTCCACATGTCATACTGGAGAATGCCCTGTGAAACAGGAGATCCCTCGTATG 3288 Query 80591 TCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAA 80650 || ||| || |||| | || ||||||| || || | | || || ||||| || | Sbjct 3289 TCGAGTATGGACCCTGCTCCTCTGCCAGCTTGCAAGAGGCAGTCAGAGCAGCGTGGTAGA 3348 Query 80651 TGCACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCA 80710 || |||||||| |||||| | | | || |||| || ||||| | || | | Sbjct 3349 TGGTCTCAAAGATCTTCTTGTTGAGATCACGAGCCTCAGGAGACTCGAAAGGCAGACGGA 3408 Query 80711 TCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGT 80770 | ||| |||||||||| || || ||||| | |||| || | ||||||| ||| Sbjct 3409 GTGCAAGGAAAGCGTCAGCCAGACCTTGGACGCCCAGACCGATAGGCCTGTGGCGCATGT 3468 Query 80771 TCGATCGCTCG-GCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTG 80829 | | | || |||||| | | ||||| |||| ||||||| ||| |||||| Sbjct 3469 T-GCTGTTGCGTGCCTCCTGGACGGGGTAGTAGTTGACTTCGATGATCTTGTTGAGGTTG 3527 Query 80830 CGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCCT----- 80884 || ||| || | || || ||||| ||||||| ||||||| ||| ||| | Sbjct 3528 CGAACAACGACTTGAGTGACCTCATGGAGTTTCTCAAAGTCGTATTCA--CCCTTGTGGT 3585 Query 80885 --TC-ACAAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCAT 80941 || || || || || |||||| || || ||||| || || ||||| |||| Sbjct 3586 AGTCGACGAACTGGGGCAGAGCCAGGGAAGCAAGGTTGCATACAGCAACCTCGTCAGGGG 3645 Query 80942 CTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCT 81001 | | |||||| || |||||||| | || || ||| ||||| ||||| |||| Sbjct 3646 CAGAGTACTCGATAATCTCCGTGCAGAGGTTGGAGCTGCGAATGGTACCAAGGTTCTTCT 3705 Query 81002 GGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCT 81061 |||| |||| |||||| |||||||| |||| ||||| |||| ||||| || Sbjct 3706 GGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAACGGGTTACCAGTCTCAGTCT 3765 Query 81062 GTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTT 81121 | | || ||||||| || ||||| | | ||||||| | |||||| || || Sbjct 3766 GAGCCTCCAGGATGGAGTACCAAAGTTTCTGGGCCTTGATCGTCTTGCGACCCTTACCGG 3825 Query 81122 CGGCCACATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGT-GAAGTTCAGTGAGGTCT 81180 | | ||||||| | || | ||||||| |||||| | ||| | | |||| | Sbjct 3826 CCTGCTCATACTTCTCATACAGAGCCTCGAACTCTTCACCGTAGCAGTCC-GCGAGGCCA 3884 Query 81181 GGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAA 81240 ||||||||||| |||||||||| | ||||||| || ||||| || ||||||||| Sbjct 3885 GGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCCGTTTTTCTCAACGCGCTTCATGAAC 3944 Query 81241 GCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGG 81300 ||||||||||| || ||| ||||||||| ||| || |||||| | || ||| Sbjct 3945 AGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGGCACGAATCTCCTCCTTTCCGTGG 4004 Query 81301 TTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCG 81360 || | | ||||| || || | || || || ||||| ||||| || || | ||| Sbjct 4005 TTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGCGTGCCACGGCTCAAGGTAGATGGCA 4064 Query 81361 ATCGACCCCTTGCG---ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACA 81417 | | || ||| ||||||||||| |||||| || || || ||| || ||| Sbjct 4065 AAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCTGTGTTGTTGAACACA 4124 Query 81418 CGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTG 81477 |||| ||| || | || || | || ||||| ||||| ||||| || || || Sbjct 4125 CGCAGCATGGGAACAATGCCGTTCGAGGTGCCGTTGGTACCGGCGATATAGGAGCCAGTG 4184 Query 81478 GCGCGCACCTTGCTGATTGA----AAGACCGATGCCACCTGACCACTTTGAAATCTGAGC 81533 || || | ||| ||| || |||||||| || || | | ||| || ||| || Sbjct 4185 GCACGGA---TGC-GATGGACGTTGAGACCGATACCGCCAGCCATCTTGGAGATCATGGC 4240 Query 81534 ACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAA 81593 ||| || | ||| || || |||||||| ||||| || | ||||| |||| || ||| Sbjct 4241 ACAAGTCTTGAGGGTGTCGTAGATTCCCTCAATGCTGTCGTCCTTCATATCAACCAGGAA 4300 Query 81594 ACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAAT 81653 || |||| ||||| || |||||| ||||| || || |||| ||||| | Sbjct 4301 GCATGACGACAACTGAGCCTGCGGTGTGCCGGCGTTGAAAAGCGTCGGGGAGGCGTGTGT 4360 Query 81654 GAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTG 81713 ||| | | | ||||| |||| |||||||| |||| || ||| | |||||| Sbjct 4361 GAAGAATTTGCTAGACATAAGGTTGTAGGTTTCGATGACTCGCTCAATGTTGTCACCCCA 4420 Query 81714 AATACCGATAGCTACACGCATAAACATGTACTGGGGCGTCTCG 81756 ||||| | ||| |||||||| | ||||| ||| ||| ||||| Sbjct 4421 GATACCTACAGCAACACGCATGATCATGTGCTGTGGCCTCTCG 4463 >seq3189 Length=50234 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || ||||| || || || |||||||| ||||| | ||||| ||||| Sbjct 4387 ATGCAGATTTTCGTCAAAACCCTCACTGGCAAGACGATTACCTTGGAGGTCGAGTCCTCC 4446 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | ||| | ||| | || || |||||||||||||| |||||||| ||||| Sbjct 4447 GATACCATCGACAATGTAAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 4506 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || || ||||| ||||| ||||| || ||||| | ||| ||||| | ||||| || Sbjct 4507 CAACGCCTTATTTTCGCTGGAAAGCAGCTTGAGGACGGTCGGACCCTTTCCGACTACAAC 4566 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||||||||| ||| || ||| | ||| | ||||| || ||||| Sbjct 4567 ATCCAAAAGGAGAGCACCCTCCATTTGGTCCTTCGTCTCCGTGGTGG 4613 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| | || |||||||| || || | ||||| ||||| Sbjct 4615 ATGCAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACGTTGGAGGTCGAGTCTTCA 4674 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | || | || || || ||||||||||| |||||||| ||||| Sbjct 4675 GACACGATTGACAATGTTAAATCCAAGATCCAAGACAAGGAGGGTATTCCTCCGGACCAA 4734 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || ||||| ||||| | ||||||| || || || | ||||| || Sbjct 4735 CAGCGACTGATCTTCGCTGGAAAGCAGTTGGAGGATGGACGCACGCTGTCCGACTACAAC 4794 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||||||||| ||||| || | ||| ||||||| || ||||| Sbjct 4795 ATCCAAAAGGAATCTACTCTGCACTTGGTCCTGCGTCTGCGTGGTGG 4841 Score = 140 bits (154), Expect = 4e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||||||||||||||| || || || || || ||||| || Sbjct 4843 ATGCAAATCTTCGTCAAGACGCTTACCGGCAAAACCATCACACTCGAAGTTGAATCTTCA 4902 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | || | || ||||| ||||||||||| || || || ||||| Sbjct 4903 GACACAATCGACAACGTCAAATCAAAGATTCAAGACAAGGAGGGTATCCCGCCTGACCAA 4962 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| | || ||||| || ||||| || ||||||| || ||||| | || || ||| Sbjct 4963 CAACGTTTGATCTTTGCGGGCAAGCAGCTGGAGGATGGACGAACCCTGTCTGATTACAAT 5022 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 | || ||||| || ||||| || || || | |||||||| || || || Sbjct 5023 ATTCAGAAGGAGTCGACTCTGCACCTTGTGCTCCGTCTTCGTGGCGGTCA 5072 Score = 136 bits (150), Expect = 5e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || |||||||| || || || ||||| ||||| | |||| ||| | || | ||| | Sbjct 4183 ACTGGCAAGACCATCACCCTCGAGGTGGAGTCTAGCGATACCATCGACAACGTCAAGTCG 4242 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || |||||||||||||| || ||||| ||||| |||||||| |||||||| || ||| Sbjct 4243 AAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAACAGCGTCTTATTTTTGCCGGCAAG 4302 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 ||||||||||| | ||| || || | ||||| || |||| ||||| ||||| || Sbjct 4303 CAACTCGAGGACGGTCGGACACTTTCCGACTACAACATCCAGAAGGAGAGTACTCTCCAC 4362 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || || | || || || ||||| Sbjct 4363 CTCGTGCTCCGCCTCCGTGGTGG 4385 >seq2954 Length=190517 Score = 154 bits (170), Expect = 2e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| ||||| |||||||| || || ||||||||||| || |||||||| ||||| Sbjct 87404 ATCATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCG 87463 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | || | ||| | ||| | ||| | || || |||||||||||||| || || || ||| Sbjct 87464 AGCGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGAC 87523 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||||| | || ||||| || ||||| || ||||| | | ||||| | ||||| Sbjct 87524 CAGCAGCGCTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCAGGACCCTGTCCGACTAC 87583 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || |||| ||||| ||| || || || || ||||||| || ||||| Sbjct 87584 AACATCCAGAAGGAGAGCACCCTCCACCTCGTGCTGCGTCTGCGTGGTGG 87633 >seq2996 Length=133832 Score = 131 bits (144), Expect = 2e-25 Identities = 138/182 (76%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| || ||||| || || |||||||| || || | ||||| ||||| || | || Sbjct 19044 CTTCGTGAAGACTCTGACTGGCAAGACCATCACCTTGGAGGTCGAGTCCTCGGACACGAT 18985 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | ||| ||||| | || ||||||||||||||||||||||| || ||||| |||||||| Sbjct 18984 CGACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGAATTCCCCCTGACCAACAGCGTCT 18925 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 || |||||||| ||||| || ||||| | ||||| || | ||||| || |||| || Sbjct 18924 TATCTTTGCTGGCAAGCAGCTGGAGGACGGCCGTACTCTCTCCGACTACAACATCCAGAA 18865 Query 27594 GG 27595 || Sbjct 18864 GG 18863 >seq3358 Length=30968 Score = 82.4 bits (90), Expect = 9e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 64771 TCTATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTG 64830 || || |||||||| || ||||| ||||||||||| |||||| | || || |||||||| Sbjct 2037 TCCATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTGACTTTCTCCAACGAGCTC 1978 Query 64831 ATCTCTCGGGACGAGGGGCTCCACCAAGAATTTGCGGTTACCCTGTTC 64878 ||||| || || ||||| || ||| || ||||| | ||||||| Sbjct 1977 ATCTCGCGTGATGAGGGTCTACACACCGACTTTGCCTGTCTCCTGTTC 1930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570279738687120