Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001675605.1_202016-06-23] 4,301 sequences; 42,962,175 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq3263 109 4e-19 >seq3263 Length=39466 Score = 109 bits (120), Expect = 4e-19 Identities = 267/400 (67%), Gaps = 10/400 (3%) Strand=Plus/Plus Query 30062 ACGTAAAACTG---ACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTG 30118 ||||||||||| | ||||| |||||||| || || |||| || | ||| ||| Sbjct 925 ACGTAAAACTGCGCAAACATG---TGGCACGGCGGCAGGACCATAAGCTTGAGGTCCTTG 981 Query 30119 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 30178 |||||||| || | | | ||||| | ||| | ||||| | | || || |||| Sbjct 982 GGGTTCCAAGCACTAAGAACCATGCGGCGGTCGTACGGGTTCGTGCGGAGCTTGTGCACG 1041 Query 30179 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCT 30238 | | ||||| || || ||| |||| ||||||||| ||| ||||| || Sbjct 1042 ACCTCGGCGAGCTGGTCGACGCCCTGGCCCGTGTAGTCTGCGTGGCAGTCGGTGTATTCG 1101 Query 30239 GCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC 30298 || || || || | ||| ||||| ||||| || || |||||||| ||| | || | |||| Sbjct 1102 GCGCCAAAGTGGCGCCATTGGAAGCCGTAGACGGGGCCCAGGTCGCCCACCTCGCGGTGC 1161 Query 30299 TCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC- 30357 | || ||| | ||||| || || | | |||||| ||||||||||||| ||||| Sbjct 1162 TGCAATCCCAGCCCGTCCAGGAACTCACGGCTGCCGTTGCCGTCCCAGATCTTGACCCCG 1221 Query 30358 -CTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCA 30416 | || | || | ||| | | || | || ||||||||||||||||| | Sbjct 1222 GCGTCGCTCAG-GGGCTTCGCCG-ACGTCGCGCCCGACACGAACCACAGCAGCTCGAGGA 1279 Query 30417 CGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 |||||| | | ||||| | ||| ||||| || || || Sbjct 1280 TCACGGCCCGCGAGAAGACGCGCTTCGTCGTCAGCAGAGG 1319 Score = 98.7 bits (108), Expect = 8e-16 Identities = 155/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 29821 CCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGG 29880 |||||| ||| || ||| || || || ||||| | ||| ||||| || || | Sbjct 603 CCTGTTGATCTCGAGCTCGGGGAACGGCCTCGGCTCGCGCTCCAGCTGCATCCGGAGTGC 662 Query 29881 TTCCACGTTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTGGACAAACTCTCCCGGTTC 29940 || |||| || |||||||||||| || |||| | ||| | | || || | Sbjct 663 GTCGACGTGGTCGGCGTAGACGTGAGCATCGCCCATGACGTGCGTCAGCGACCCGGGCAC 722 Query 29941 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 30000 ||| || ||| | | || ||||||| ||| || || | ||||||||| ||||| ||||| Sbjct 723 TAGACCCGTGGCACGCGCAATCATGTGCGTCAGCAGTGCGTAGCTGGCAATGTTGAAGGG 782 Query 30001 TACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 30042 || || || |||||||| | |||| |||||||||||| || Sbjct 783 CACGCCTAGGCCCATGTCGCAGGACCGCTGGTAGAGCTGGCA 824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406289101843692