Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001675605.1_202016-06-23] 4,301 sequences; 42,962,175 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq3263 131 2e-25 >seq3263 Length=39466 Score = 131 bits (144), Expect = 2e-25 Identities = 158/213 (74%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 6499 GAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTT 6558 ||||| ||||||||| | ||||| || | |||||| |||||||| |||| ||||| Sbjct 615 GAGCTCGGGGAACGGCCTCGGCTCGCGCTCCAGCTGCATCCGGAGTGCGTCGACGTGGTC 674 Query 6559 CAGGTAGATATGCGCATCCCCCA--ACGTATGCACCAGCTCCCCAGGAACCAACCCCACG 6616 ||||| || ||||| |||| |||| || |||| ||| || || | ||| | Sbjct 675 GGCGTAGACGTGAGCATCGCCCATGACGT--GCGTCAGCGACCCGGGCACTAGACCCGTG 732 Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676 || | || ||||||| ||| ||||| ||||| || ||||||||||| ||||| |||| Sbjct 733 GCACGCGCAATCATGTGCGTCAGCAGTGCGTAGCTGGCAATGTTGAAGGGCACGCCTAGG 792 Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAG 6709 |||||||| | || || || |||||||||||| Sbjct 793 CCCATGTCGCAGGACCGCTGGTAGAGCTGGCAG 825 Score = 131 bits (144), Expect = 2e-25 Identities = 158/213 (74%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695 |||||||||||| || || || | |||||||| |||| ||||| ||||||||||| || Sbjct 825 CTGCCAGCTCTACCAGCGGTCCTGCGACATGGGCCTAGGCGTGCCCTTCAACATTGCCAG 766 Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGT 34755 ||||| ||||| ||| ||||||| || | || | ||| | || || ||| |||| Sbjct 765 CTACGCACTGCTGACGCACATGATTGCGCGTGCCACGGGTCTAGTGCCCGGGTCGCTGAC 706 Query 34756 GCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCAG 34813 || |||| |||| ||||| || ||||| ||||| |||| |||||||| ||| Sbjct 705 GC--ACGTCATGGGCGATGCTCACGTCTACGCCGACCACGTCGACGCACTCCGGATGCAG 648 Query 34814 CTGCAACGAGAGCCCCGACCGTTCCCCCAGCTC 34846 ||| | || ||||| | ||||||||| ||||| Sbjct 647 CTGGAGCGCGAGCCGAGGCCGTTCCCCGAGCTC 615 Score = 125 bits (138), Expect = 6e-24 Identities = 279/408 (68%), Gaps = 12/408 (3%) Strand=Plus/Plus Query 6721 ATTCGCGACGTAGAATTG-GCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGAT 6779 || || |||||| || || ||| | |||||||||| || || |||| || ||| | Sbjct 918 ATACGAGACGTAAAACTGCGCAAACA-TGTGGCACGGCGGCAGGACCATAAGCTTGAGGT 976 Query 6780 CCTTCGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTG- 6838 |||| |||||||| || | | || || | | ||| | |||||| | | || | Sbjct 977 CCTTGGGGTTCCAAGCACTAAGAACCATGCGGCGGTCGTACGGGTTCG--TGC--GGAGC 1032 Query 6839 TCGATCACGTACT--GC-AGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCC 6895 | | |||| || || |||||||| | ||||| |||| ||||| || | || | Sbjct 1033 TTGTGCACGACCTCGGCGAGCTGGTCGACGCCCTGGCCCGTGTAGTCTGCGTGGCAGTCG 1092 Query 6896 CGATACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCC 6955 || || || |||||||| | ||| ||||| |||||||| ||||||| ||||||| || Sbjct 1093 GTGTATTCGGCGCCAAAGTGGCGCCATTGGAAGCCGTAGACGGGGCCCAGGTCGCCCACC 1152 Query 6956 TCCCGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATC 7015 || || | || ||| || |||||| || || || |||| ||||||||||| Sbjct 1153 TCGCGGTGCTGCAATCCCAGCCCGTCCAGGAACTCACGGCTGCCGTTGCCGTCCCAGATC 1212 Query 7016 TTCACCCCCCGGGACG-AGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAG 7074 || | |||| | | || || ||| | ||| || ||| ||||||||||||||| Sbjct 1213 TTGA-CCCCGGCGTCGCTCAGGGGCTTCGCCGACGTCGCGCCCGACACGAACCACAGCAG 1271 Query 7075 CTCCTCGACCACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGG 7122 ||| || |||| || | || | || || |||||||||||||| || Sbjct 1272 CTCGAGGATCACGGCCCGCGAGAAGACGCGCTTCGTCGTCAGCAGAGG 1319 Score = 125 bits (138), Expect = 6e-24 Identities = 279/408 (68%), Gaps = 12/408 (3%) Strand=Plus/Minus Query 34223 CCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTC 34282 || |||||||||||||| || || | || | || |||| || ||||||||||||||| Sbjct 1319 CCTCTGCTGACGACGAAGCGCGTCTTCTCGCGGGCCGTGATCCTCGAGCTGCTGTGGTTC 1260 Query 34283 GTGAGGGGGGCCACGAACACCAAGGAGCTCT-CGTCCCGGGGGGTGAAGATCTGGGACGC 34341 ||| ||| || ||| | ||| || || | | |||| | ||||||||||||| Sbjct 1259 GTGTCGGGCGCGACGTCGGCGAAGCCCCTGAGCGACGCCGGGG-TCAAGATCTGGGACGG 1201 Query 34342 TCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTT 34401 |||| || || || |||||| || ||| || | || |||| ||||||| | Sbjct 1200 CAACGGCAGCCGTGAGTTCCTGGACGGGCTGGGATTGCAGCACCGCGAGGTGGGCGACCT 1141 Query 34402 GGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCGAAGC 34461 |||||| |||||||| ||||| ||| | |||||||| || || || | || | || Sbjct 1140 GGGCCCCGTCTACGGCTTCCAATGGCGCCACTTTGGCGCCGAATACACCGACTGCCACGC 1081 Query 34462 GGACTATTCGGGACAGGGAGCGGACCAGCT-GC--AGTACGTGATCGA-CACCTTGAAGC 34517 ||||| |||| ||||| | |||||||| || || |||| | | | || | | Sbjct 1080 AGACTACACGGGCCAGGGCGTCGACCAGCTCGCCGAGGTCGTGCACAAGCTCC--GCA-- 1025 Query 34518 GGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGA 34577 |||||| | ||| | | || || | | || |||||||| ||||| ||| || | Sbjct 1024 CGAACCCGTACGACCGCCGCATGGTTCTTAGTGCTTGGAACCCCAAGGACCTCAAGCTTA 965 Query 34578 TGGCGCTCCCCCCGTGCCACACCCTCTGC-CAATTCTACGTCGCGAAT 34624 ||| || || |||||||||| | ||| || || |||||| || || Sbjct 964 TGGTCCTGCCGCCGTGCCACA-TGTTTGCGCAGTTTTACGTCTCGTAT 918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448238300292720