Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001675605.1_202016-06-23] 4,301 sequences; 42,962,175 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq2954 174 1e-38 seq3189 150 2e-31 seq2996 113 4e-20 seq2964 84.2 2e-11 >seq2954 Length=190517 Score = 174 bits (192), Expect = 1e-38 Identities = 180/234 (77%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 ||| || || || ||||| | ||| || || || |||||||||||||| ||||| ||||| Sbjct 87637 ACCACCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTC 87578 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751 ||| ||||| | |||| || |||||||||||||| || |||| |||||| ||||||| Sbjct 87577 GGACAGGGTCCTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGG 87518 Query 41752 GGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGAC 41809 ||| | | |||||||||| ||| || ||| || | || | |||||||||||| Sbjct 87517 GGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG--ATGGTGTCGCTCGAC 87460 Query 41810 TCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||||||| | || || || || ||||| || ||||| ||||| ||||||||| Sbjct 87459 TCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 87406 >seq3189 Length=50234 Score = 150 bits (166), Expect = 2e-31 Identities = 173/231 (75%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | |||| ||| || ||||||||||| || ||||| |||||||| Sbjct 4614 GCCACCACGGAGACGAAGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGA 4555 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||| || |||| || |||||||| || ||||| || ||||| |||||||||| || Sbjct 4554 AAGGGTCCGACCGTCCTCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGG 4495 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCC 41812 || | |||||||||| ||| || ||| || | || | || ||| ||||| Sbjct 4494 AATACCCTCCTTGTCCTGGATCTTCGACTTTACATTGTCG--ATGGTATCGGAGGACTCG 4437 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||||| || ||||| || || || || || || ||||||||||||||| Sbjct 4436 ACCTCCAAGGTAATCGTCTTGCCAGTGAGGGTTTTGACGAAAATCTGCATG 4386 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| ||||| || ||||| || ||||| |||||||| Sbjct 4841 CCACCACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 4782 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || | |||||| || ||||| ||||| ||||||||||||| ||| Sbjct 4781 AGCGTGCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGA 4722 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||| | || | || | || ||| | | | ||||| ||||| || Sbjct 4721 ATACCCTCCTTGT-CTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGAC 4663 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| ||| || || || ||||||| ||||| ||||| ||||||||| Sbjct 4662 CTCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCATG 4614 Score = 120 bits (132), Expect = 3e-22 Identities = 151/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | ||| || || || || ||||||||||| ||||| |||||||| Sbjct 4386 GCCACCACGGAGGCGGAGCACGAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGA 4327 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || || || |||| ||||| ||||||||||| || || || ||||||||||||| || Sbjct 4326 AAGTGTCCGACCGTCCTCGAGTTGCTTGCCGGCAAAAATAAGACGCTGTTGGTCCGGAGG 4267 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | |||||||||| ||| || ||| ||| | | | || ||||| ||||||| Sbjct 4266 GATACCCTCCTTGTCCTGGATCTTCGACTT-GACGTTGTCGATGGTATCGCTAGACTCCA 4208 Query 41814 CCTCCACCGTTATCGTTTTACCCGT 41838 |||| | || || || || || || Sbjct 4207 CCTCGAGGGTGATGGTCTTGCCAGT 4183 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || ||||| | ||| || ||||| || |||||||||||| || || || || Sbjct 5069 CCGCCACGAAGACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGAC 5010 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || || ||||||||||| || || |||| || |||||||| | || Sbjct 5009 AGGGTTCGTCCATCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGGG 4950 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||| | ||| | |||| || ||| | | | ||||| || || || Sbjct 4949 ATACCCTCCTTGT-CTTGAATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAAC 4891 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || || ||||| || || |||||||| ||||| || ||||| Sbjct 4890 TTCGAGTGTGATGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 4843 >seq2996 Length=133832 Score = 113 bits (124), Expect = 4e-20 Identities = 138/183 (75%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| ||||||||||| || || |||| || ||||||||||| || || | Sbjct 18863 CCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCCAGCTGCTTGCCAGCAAAGA 18922 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGAC 41791 | || ||||||||||| | ||||| | |||||||||| ||| | || | |||| || Sbjct 18923 TAAGACGCTGTTGGTCAGGGGGAATTCCCTCCTTGTCC-TGAATCTTGGACTTC-ACATT 18980 Query 41792 GAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 | | | ||||| ||||| ||||||| || || || || || ||||| ||||| || Sbjct 18981 GTCGATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGAGTCTTCAC 19040 Query 41851 GAA 41853 ||| Sbjct 19041 GAA 19043 >seq2964 Length=184882 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 85799 TCGTATCGCACCTCGTTCCGGCCTCGCCAGCAAGCACGGTATCGACGTGGGCGCCGGGGT 85858 |||||||||||| || ||||| ||||| ||| ||| |||||| |||||||| || Sbjct 78743 TCGTATCGCACCCCGCTCCGGTCTCGCGGCCAAACACTTCATCGACACCGGCGCCGGCGT 78802 Query 85859 CATCGACGCCGACTACCGCGGAAACGTCATCATCGTACTCTTCAACCACGGCGA 85912 ||| || |||||||||||||| | |||| || | | |||||||||| ||| Sbjct 78803 CATTGATGCCGACTACCGCGGTCAGGTCAAGGTCCTGTTGTTCAACCACGCCGA 78856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462279145381200