Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001675615.1_202016-06-23] 10,105 sequences; 42,084,471 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq3398 114 3e-20 >seq3398 Length=2724 Score = 114 bits (126), Expect = 3e-20 Identities = 257/388 (66%), Gaps = 20/388 (5%) Strand=Plus/Minus Query 254011 TGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAA 254070 |||| ||| |||| |||||||| || || ||||| || ||| |||| ||||||||| Sbjct 2583 TGCTCTTCTACGGCCCTCCCGGCACGGGTAAGACCTCGACCGTCCTCGCGCTGGCCAAGG 2524 Query 254071 CCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAAC 254130 || || ||| || ||||| ||||||||| ||||| ||||| || ||||||| Sbjct 2523 AGCTTTTCGGCCCGGAACTCATGAAGTCGCGCGTGCTGGAGCTCAACGCCTCGGACGAAC 2464 Query 254131 GCGGGTTGGACGTCGTCCGCGACAAGATCAA-GACTTTCTCCAAGATGTCGATTTCGTCG 254189 | || | | |||| || || ||| |||| |||||| || ||| | | | Sbjct 2463 GTGGCATCTCCATCGTGCGAGAAAAGGTCAAAGACTTTGCCCGC-ATGCAGCTCACCAAC 2405 Query 254190 TTCCAACCCGGCT------------------GTCCGCCTTTCAAGCTCGTGATCCTGGAC 254231 || ||||||| | ||||| |||||| | | ||||| ||| Sbjct 2404 CCCCCGCCCGGCTACAAGTCGAAGTACCCATGCCCGCCCTTCAAGATTATCATCCTCGAC 2345 Query 254232 GAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGATGGAGACGCAC 254291 ||||| ||| ||||||| ||||||||| ||| || || | || |||||||| || Sbjct 2344 GAGGCCGACTCCATGACCCAGGACGCGCAGAGCGCTCTGCGAAGGACCATGGAGACTTAC 2285 Query 254292 TCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCATCGCCCCGCTG 254351 | | ||||| || || ||| | ||||||||||| | ||||||| || ||| Sbjct 2284 AGCAAGATCACGCGGTTCTGTCTGATCTGCAACTACGTCACTCGCATCATCGATCCCCTG 2225 Query 254352 GCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 || || ||||| ||| ||||| |||| Sbjct 2224 GCATCCAGGTGCAGCAAATTTCGCTTCA 2197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073627379128640