Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001675615.1_202016-06-23]
10,105 sequences; 42,084,471 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq1305 194 2e-44
>seq1305
Length=10252
Score = 194 bits (214), Expect = 2e-44
Identities = 465/700 (66%), Gaps = 20/700 (3%)
Strand=Plus/Minus
Query 63221 AGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAA 63280
||| || || | ||| |||||||| | ||| || |||| | || || || ||||| ||
Sbjct 6721 AGGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCCGTTTTTCTCAACGCGCTTCATGAA 6662
Query 63281 GAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGT 63340
|||||||| ||||||||||| | || || || | | | | ||||| |||||
Sbjct 6661 CAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGGCACGAATCTCCTCCTTTCCGTG 6602
Query 63341 ATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 63400
||||| | || ||||||||| | | | ||| | |||||||| || | ||| |||||
Sbjct 6601 GTTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGCGTGCCACGGCTCAAGGTAGATGGC 6542
Query 63401 CATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 63460
| | || || || ||||| || ||||| || | ||| | ||| ||||| || | ||
Sbjct 6541 AAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCTGTGTTGTTGAACAC 6482
Query 63461 TCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACT 63520
| || ||| |||| ||| ||||| || | || |||||||||| ||||||| ||| |
Sbjct 6481 ACGCAGCATGGGAACAATGCCGTTCGAGGTGCCGTTGGTACCGGCGATATAGGAGCCAGT 6422
Query 63521 GGCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 63578
|||||| || | | ||| ||||| || || || ||||| || ||||| | ||
Sbjct 6421 GGCACGGATGCGATGGACGTTG--AGACCGATACCGCCAGCCATCTTGGAGATCATGGCA 6364
Query 63579 CATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAA 63638
|| || | ||||| ||||| || || ||||| || || |||| | || || ||
Sbjct 6363 CAAGTCTTGAGGGTGTCGTAGATTCCCTCAATGCTGTCGTCCTTCATATCAACCAGGAAG 6304
Query 63639 CAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 63698
|| |||| || | | || || || || || | || || || ||||| ||
Sbjct 6303 CATGACGACAACTGAGCCTGCGGTGTGCCGGCGTTGAAAAGCGTCGGGGAGGCGTGTGTG 6244
Query 63699 AACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT------ATCCCAT 63752
|| |||| ||| | || ||||| || || || || || || | ||||
Sbjct 6243 AAGAATTTGCTAGACATAAGGTTGTAGGTTTCGATGACTCGCTCAATGTTGTCACCCCA- 6185
Query 63753 TGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTG 63812
|| ||||| || |||||||| | ||||||||| || || || ||||| |||
Sbjct 6184 -----GATACCTACAGCAACACGCATGATCATGTGCTGTGGCCTCTCGACAATCTTGCCA 6130
Query 63813 TTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAA 63870
|| | ||||| | ||| || | || | ||| || || || ||||| | ||| |||||
Sbjct 6129 TTGAGCTTCAATAGGTAAGACCTCTCGAGAGTCTTGAAGCCGAAATATTGGTAGTTGAAA 6070
Query 63871 AGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTT 63910
|| || ||||| | |||| | || | ||| | |||||
Sbjct 6069 --TCACGGTCGTAGACAATAGCTGAGTCGAGATCCTCCTT 6032
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629738046164400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |