Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001675615.1_202016-06-23] 10,105 sequences; 42,084,471 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq1305 405 1e-107 seq1521 187 5e-42 >seq1305 Length=10252 Score = 405 bits (448), Expect = 1e-107 Identities = 1130/1716 (66%), Gaps = 71/1716 (4%) Strand=Plus/Minus Query 243741 TGAACTGGA-CGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGT 243799 ||||||| | ||| || | |||| |||| |||| |||||||||||| ||||||||||| Sbjct 7904 TGAACTGAATCGGCTGGG-CGGCTGCCTGCGTCCGCAGGTAGTACATACCGGTCTTGAGA 7846 Query 243800 CCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCG 243859 ||| |||| || || ||||| | || | ||| ||| ||||| Sbjct 7845 CCAAGCTTCCAGCCGGTGAAATGCATCGAGGTGATCTTGCCCAT-----------GGTCG 7797 Query 243860 TCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCG 243919 |||| || || |||||| |||||| |||||| | ||||| | || || ||| Sbjct 7796 GG-TCGCGCATGTGGATGTTGAGCGACTGGGACTGGTCAATGAAGGCACCACGGTCAGCG 7738 Query 243920 GCCATGGTGATGA-GGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAG 243978 ||||| | || ||| | | || || ||||| | | |||||||||| |||| Sbjct 7737 GCCATCTGAACGACGGTACGT-TGCGAGATCTCCCAAACAGTCTTGTAGAGCTTCTTGGT 7679 Query 243979 GTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCG 244038 | ||| |||| | | |||||||| | ||||| | | |||||| || | Sbjct 7678 ATCCTCAGGGATGCTGGCAATGTTCTGGATGGAGCCTCCCTCGGCGATGATACGGTTCTT 7619 Query 244039 CATGTTATCGTTCCACAGGCCCAAGCGCT-CCAGCGCCTCGA----CCAGGTGCCTGTTC 244093 ||||| || |||||| || |||| | |||| ||| || ||||| | || Sbjct 7618 CATGTCGTCTGACCACAGACC-AAGCTCGACCAGATCCTTGAGCAACCAGGGG----TTG 7564 Query 244094 ACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCG 244153 || ||||| ||||| || | ||||| ||||| ||||| | |||| | ||||| Sbjct 7563 ACTACCTGGAACTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGCTCA 7504 Query 244154 ATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGC 244213 | || ||| ||||||| || || |||| |||||| || || |||||||| | || ||| Sbjct 7503 AAGCACTCGTTGTTGCCAAGGATTTGCGACGTGCTAGCTGTAGGCATGGGGGCAACGAGC 7444 Query 244214 AGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATG 244273 | ||||| | || || || || |||| | |||| ||| ||||||||| Sbjct 7443 AAGCTGTTGCGGACACCATGTTGCTTGATGTTGGCCTTGAGAGCGTCCCAGTCCCA---- 7388 Query 244274 CCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACG 244333 |||||| | | |||| | |||||||||| |||| || | |||| || Sbjct 7387 -----GAGGTCTGAGGGCTTGACGTTCCACATGTCATACTGGAGAATGCCCTGTGAAACA 7333 Query 244334 GGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTC-GTC 244392 || |||||||| |||| ||| ||||| | || |||||||| || | ||| Sbjct 7332 GGAGATCCCTCGTATGTCGAGTATGGACCCTGCTCCTCTGCCAGCTTGCAAGAGGCAGTC 7273 Query 244393 GAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCA 244452 || || |||| |||||||||||| |||||| ||||||| | || || |||| | | | Sbjct 7272 -AGAGCAGCGTGGTAGATGGTCTCAAAGATCTTCTTGTTGAGATCACGAGCCT--CAGGA 7216 Query 244453 GGT--GAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCG 244510 | ||| || | | | | ||| |||| ||||| || || ||||| | ||| Sbjct 7215 GACTCGAAAGGCAGACGGAGTGCAAGGAAAGCGTCAGCCAGACCTTGGACGCCCAGACCG 7156 Query 244511 ATGGGTCTGTGTCGCTTGTTGGAGC-GCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTC 244569 || || ||||| ||| ||||| | || || || | || |||||||| ||||| | || Sbjct 7155 ATAGGCCTGTGGCGCATGTTGCTGTTGCGTGCCTCCTGG-ACGGGGTAGTAGTTGACTTC 7097 Query 244570 GATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTC 244629 ||| | ||||||||||||||| | | | ||| || || || |||||| Sbjct 7096 GATGATCTTGTTGAGGTTGCGAACAACGACTTGAGTGACCTCATGGAGTTTCTCAAAGTC 7037 Query 244630 GTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGC 244689 ||| || | ||| | |||| || || |||| | || || | | || Sbjct 7036 GTATTC------ACCCTTG----TGGTAGTCG--ACGAACTGGGGCAGAGCCAGGGAAGC 6989 Query 244690 CAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTT 244749 |||||||| || || ||||| || | | | ||||| || |||||| ||||||||||| Sbjct 6988 AAGGTTGCATACAGCAACCTCGTCAGGGGCAGAGTACTCGATAATCTCCGTGCAGAGGTT 6929 Query 244750 ACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTA 244809 || ||||| || |||| || || ||| |||| ||||||| |||||||| Sbjct 6928 GGAGCTGCGAATGGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTA 6869 Query 244810 GAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCT 244869 |||||||| || || ||||| ||| || | |||| | || ||| || | | Sbjct 6868 CAGCATGAACGGGTTACCAGTCTCAGTCTGAGCCTCCAGGATGGAGTACCAAAGTTTCTG 6809 Query 244870 AGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAA 244929 ||||||| |||| ||||| |||| || | ||| || ||||| |||||||| Sbjct 6808 GGCCTTGATCGTCTTGCGACCCTTACCGGCCTGCTCATACTTCTCATACAGAGCCTCGAA 6749 Query 244930 CTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTC 244989 ||| || || || | ||||| |||||| ||||||||| | |||| || Sbjct 6748 CTCTTCACCGTAGCAGTCCGCGAGGCCAGGGCACTCGTTCGGGCACATCAAGGTCCAGTC 6689 Query 244990 GCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTC 245049 |||| | || || | || |||||| || || |||||||| || || |||| ||||| Sbjct 6688 GCCGTTTTTCTCAACGCGCTTCATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGGTC 6629 Query 245050 CCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTC 245109 | || | ||| ||| || ||||||||| || || | || || ||||| || Sbjct 6628 ACGGGCACGAATCTCCTCCTTTCCGTGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATC 6569 Query 245110 GACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTC 245169 ||||||| ||||| | ||||| || | ||| ||||| ||||||||||| |||||||| Sbjct 6568 TGCGTGCCACGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTC 6509 Query 245170 CACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGT 245225 | | | ||||| |||||| | ||||| | || || |||||||| ||| Sbjct 6508 GA----CGTAGCGAGCTGTGTTGTTGAACACACGCAGCATGGGAACAATGCCGTTCGAGG 6453 Query 245226 GGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGAC----ATG 245281 ||||||||| || ||| |||| ||| || | | || ||| ||||||| | Sbjct 6452 TGCCGTTGGTACCGGCGATATAGGAGCCAGTGGCAC---GGATGC-GATGGACGTTGAGA 6397 Query 245282 CCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCC 245341 || | ||||| || ||||||||| | ||| || |||||| |||||| || ||| Sbjct 6396 CCGATACCGCCAGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATTCCC 6337 Query 245342 TCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTG 245401 || |||||||| |||||| | | ||| ||||| || |||| ||| | || || || Sbjct 6336 TCAATGCTGTCGTCCTTCATATCAACCAGGAAGCATGACGACAACTGAGCCTGCGGTGTG 6277 Query 245402 CACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAG 245437 | | |||||| || || ||| |||||| || ||| Sbjct 6276 CCGGCGTTGAAAAGCGTCGGGGAGGCGTGTGTGAAG 6241 >seq1521 Length=9404 Score = 187 bits (206), Expect = 5e-42 Identities = 359/518 (69%), Gaps = 15/518 (3%) Strand=Plus/Minus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACG-CAAC 42691 ||||||||| |||||||| |||||||| || | |||||| | | | || | |||| Sbjct 2326 CCCTGCATCCGCAAGAAGGCCGACTGGGCTCTGAGGTGGATC-ACCGACAAGAAGTCAAC 2268 Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751 || | | | | ||| | || || | | ||||||||| ||||||||| || || || Sbjct 2267 CTTTGCCACGCGCCTGATCGCTTTCGCTGTCGTCGAGGGTATCTTCTTCAGCGGTGCTTT 2208 Query 42752 CGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTC--GATGCCCGGACTCACCTTCTCGAAC 42809 ||||||||||||||||||||| || ||| | |||||| || || || ||||| ||| Sbjct 2207 TGCCTCCATCTTCTGGCTCAAGAAGC--GTGGCCTGATGCCTGGTCTGACTTTCTCCAAC 2150 Query 42810 GAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGC 42869 || |||||| | || ||||| || || | ||||||||||| |||||||||||| Sbjct 2149 GAGCTCATCTCGCGTGATGAGGGTCTACACACCGACTTTGCCTGTCTCCTGTTCTCG--- 2093 Query 42870 CACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAG 42929 | ||| | ||| |||| |||||| || || || | || || || || Sbjct 2092 CTCCTGAACAACAGGCCCAACAAGGAGGTTGTGAAGGAGATTGTTGTCGATGCTGTCAAG 2033 Query 42930 ATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGAC 42989 || ||| | ||||| || ||| || || ||||| |||| | ||||||||| | || Sbjct 2032 ATTGAGCAAGAGTTTCTTACGGAGGCGTTGCCCTGCGCCCTCCTGGGCATGAACGCCAAC 1973 Query 42990 CTCATGTGCAAGTACATCCAGTACGTCGCCGAC-CATCTCCTGT-GCCAGATGGGTCTC- 43046 || ||| ||||||| ||| ||||| ||| | || ||| ||| | || | Sbjct 1972 CTGATGAAGCAGTACATTGAGTTTGTCGCTGACAGACTTCTTGTCGCC--CTCGGAAACG 1915 Query 43047 AGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGC 43106 || | ||||| | | ||| ||||| ||||||||||||||||| | | ||| Sbjct 1914 AGAAG-GTCTACCGTGCCACCAACCCATTCGATTTTATGGAGAACATCTCACTCGGCGGC 1856 Query 43107 AAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144 ||||||||||| |||||||| ||||| | ||| ||||| Sbjct 1855 AAGACCAACTTCTTCGAGAAACGCGTTGGCGAGTACCA 1818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944219918154800