Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001675615.1_202016-06-23] 10,105 sequences; 42,084,471 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1305 300 2e-76 >seq1305 Length=10252 Score = 300 bits (332), Expect = 2e-76 Identities = 981/1502 (65%), Gaps = 54/1502 (4%) Strand=Plus/Plus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 ||| ||||||| || |||||||| || || ||| | | ||| |||| || || |||||| Sbjct 6251 GCCTCCCCGACGCTTTTCAACGCCGGCACACCGCAGGCTCAGTTGTCGTCATGCTTCCTG 6310 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 | | |||| |||| ||| ||||| | ||||| ||||||| ||||| | Sbjct 6311 GTTGATATGAAGGACGACAGCATTGAGGGAATCTACGACACCCTCAAGACTTGTGCCATG 6370 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 ||||| || || || || ||||| ||| ||||| | | ||||||| || ||| Sbjct 6371 ATCTCCAAGATGGCTGGCGGTATCGGTCTCAACGTCCATCGCATCCGTGCCACTGGCTCC 6430 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 || ||| ||||||||| |||||||| |||||| | || || ||||| || || |||||| Sbjct 6431 TATATCGCCGGTACCAACGGCACCTCGAACGGCATTGTTCCCATGCTGCGTGTGTTCAAC 6490 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 ||| | || |||||||| ||||||||||| | | | ||| | || || |||| Sbjct 6491 AACACAGCTCGCTACGTCGACCAGGGTGGCAACAAGCGCCCCGGTGCCTTTGCCATCTAC 6550 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251 || ||||| |||||||| || || | ||| ||||||| | ||||||||||| || Sbjct 6551 CTTGAGCCGTGGCACGCAGATGTCTTCGAGTTCCTCGACCTAAGGAAGAACCACGGAAAG 6610 Query 94252 GATCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308 || ||||| | ||| | ||||| ||| |||||| ||| | || || || || ||| Sbjct 6611 GA---GGAGATTCGTGCCCGTGACCTGTTCCTCGCTCTTTGGATCCCTGATCTGTTCATG 6667 Query 94309 AAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTG 94368 || ||||| ||||||||| || ||||| | | || || || || || || || || Sbjct 6668 AAGCGCGTTGAGAAAAACGGCGACTGGACCTTGATGTGCCCGAACGAGTGCCCTGGCCTC 6727 Query 94369 TCCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGA-----AT-CGCAG 94422 | ||| || || |||||| || | |||| || || || |||| Sbjct 6728 GCGGAC-----TGCTACG----GTGAAGAGTTCGAGGCTCTGTATGAGAAGTATGAGCAG 6778 Query 94423 ---GGCAAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTA 94479 || |||| | ||| || | || ||| || ||| | ||| |||| | Sbjct 6779 GCCGGTAAGGGTCGCAAGACGATCAAGGCCCAGAAACTTTGGTACTCCATCCTGGAGGCT 6838 Query 94480 CAGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAA 94538 ||| ||||| |||| || | ||| ||| |||||| | ||| |||| |||| ||| Sbjct 6839 CAGACTGAGACTGGTAACCCGTTCATGCTGTACAAGGATCACTG-CAACCGCAAGAGCAA 6897 Query 94539 CCAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATAC 94598 |||| || |||| || || ||||| || || ||||| |||||| ||||||| | Sbjct 6898 CCAGAAGAACCTTGGTACCATTCGCAGCTCCAACCTCTGCACGGAGATTATCGAGTACTC 6957 Query 94599 TTCTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCG 94658 | | || |||||| ||||||| || ||||| | ||| | ||| || ||||| || Sbjct 6958 TGCCCCTGACGAGGTTGCTGTATGCAACCTTGCTTCCCTGGCTCTGCCCCAGTTCGT-CG 7016 Query 94659 AGATGCCTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAG 94718 | | || ||| | | | | ||| | ||| | || | || | ||| Sbjct 7017 A-CTACC-ACAAG------GGTGAATACGACTTTGAGAAACTCCATGAGGTCAC-TCAAG 7067 Query 94719 --GATGGTCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCG 94776 | || || ||||| |||| | | ||||| |||| ||||||||||| |||||| Sbjct 7068 TCGTTGTTC-GCAACCTCAACAAGATCATCGAAGTCAACTACTACCCCGTCCAGGAGGCA 7126 Query 94777 GAGAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCG 94836 ||| ||| || || |||| ||||| | |||||||| ||| | || ||||| Sbjct 7127 CGCAACAGCAACATGCGCCACAGGCCTATCGGTCTGGGCGTCCAAGGTCTGGCTGACGCT 7186 Query 94837 CTGGTGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATA 94896 | | | |||||||| | ||| ||| || || | | | || ||| || Sbjct 7187 TTCCTTGCACTCCGTCTGCCTTTCGAGTCTCCTGAGGCTCGTGATCTCAACAAGAAGATC 7246 Query 94897 TTCGAAAGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGC 94956 || || | ||| || ||| || ||| || | | ||| |||| ||| Sbjct 7247 TTTGAGACCATCTACCACGCTGCTCTGACTGCCTCTTGCAAGCTGG-CAGA--GGAGCAG 7303 Query 94957 GGGCCACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTC 95016 || ||| || | | | ||||| || | |||||||||| | |||| ||| | Sbjct 7304 GGTCCATACTCGACATACGAGGGATCTCCTGTTTCACAGGGCATTCTCCAGTATGACATG 7363 Query 95017 TGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAA 95076 ||| || |||||||| | || | |||||||| ||||| || | | | || Sbjct 7364 TGGAACGTCAAGCCCTCAGACCTCTGGGACTGGGACGCTCTCAAGGCCAACATCAAGCAA 7423 Query 95077 CACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATC 95136 || ||||| ||| |||| || ||||||||||| || || |||| |||| ||| Sbjct 7424 CATGGTGTCCGCAACAGCTTGCTCGTTGCCCCCATGCCTACAGCTAGCACGTCGCAAATC 7483 Query 95137 CTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTC 95196 |||||||||||||||| || || |||| || |||||| | ||| | | || ||||| Sbjct 7484 CTTGGCAACAACGAGTGCTTTGAGCCCTATACTTCCAACATTTACCAACGCCGTGTGCTT 7543 Query 95197 GCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTC--TCTGGGTG 95254 ||||| || |||| || ||||| | || ||| ||| ||| || ||| Sbjct 7544 GCCGGCGAGTTCCAGGTAGTCAACCCCTGGTTGCTCAAGGATCTG--GTCGAGCTTGGTC 7601 Query 95255 TGTGGGGTGACAAGGTCAAGAACC--AACTGCTACGCGCCAACGGCTCCGTCCAGAACAT 95312 ||||| ||| | | ||||||| | | | || | | |||||| |||||||||| Sbjct 7602 TGTGGTCAGACGACATGAAGAACCGTATCATCGCCGAGGGA--GGCTCCATCCAGAACAT 7659 Query 95313 --CCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAG 95370 || || || || ||||| | |||| |||||||||||| || ||||||||| |||| Sbjct 7660 TGCCAGC--ATCCCTGAGGATACCAAGAAGCTCTACAAGACTGTTTGGGAGATCTCGCAA 7717 Query 95371 CG 95372 || Sbjct 7718 CG 7719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494660710275800