Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001675615.1_202016-06-23] 10,105 sequences; 42,084,471 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1501 138 1e-27 seq1521 118 1e-21 seq755 111 2e-19 seq127 111 2e-19 >seq1501 Length=9272 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | |||||||| |||||||| | || |||||| | | Sbjct 4658 ATGCAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACGTTGGAGGTCGAGTCTTCA 4599 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || || | ||||| || |||| ||||| ||||| ||||| | ||||| Sbjct 4598 GACACGATTGACAATG-TTAAATCCAAGATCCAAGACAAGGAGGGTATTCCTCCGGACCA 4540 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| || || | ||| || || ||| |||| || | ||||| || ||||||||| Sbjct 4539 ACAGCGACTGATCTTCGCTGGAAAGCAGTTGGAGGATGGACGCACGCTGTCCGACTACAA 4480 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||| | || ||||| ||||| |||||| || | || || Sbjct 4479 CATCCAAAAGGAATCTACTCTGCACTTGGTCCTGCGTCTGCGTGGTGG 4432 Score = 134 bits (148), Expect = 1e-26 Identities = 165/219 (75%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| ||||| ||||| || || ||| | || |||||| || || Sbjct 4886 ATGCAGATTTTCGTCAAAACCCTCACTGGCAAGACGATTACCTTGGAGGTCGAGTCCTCC 4827 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 || | | | | || | ||||| || |||| ||||| ||||| ||||| | |||| Sbjct 4826 GATACCATCGACAATG--TAAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCGGACC 4769 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 |||| || || |||| ||| || || ||||| || |||| || ||||| |||||||| Sbjct 4768 AACAACGCCTTATTTTCGCTGGAAAGCAGCTTGAGGACGGTCGGACCCTTTCCGACTACA 4709 Query 38422 ACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||||||||| ||| || || |||||||| || ||| Sbjct 4708 ACATCCAAAAGGAGAGC-ACCCTCCATTTGGTCCTTCGT 4671 Score = 111 bits (122), Expect = 2e-19 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || ||||| || |||||||||||||| |||| || || | | Sbjct 4430 ATGCAAATCTTCGTCAAGACGCTTACCGGCAAAACCATCACACTCGAAGTTGAATCTTCA 4371 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 |||| | | |||| | ||| ||| || | ||||| ||||| | ||||||| |||| Sbjct 4370 GACACAATCGACAACG-TCAAATCAAAGATTCAAGACAAGGAGGGTA-TCCCGCCTGACC 4313 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 |||| || | || | |||||||| |||||||| || | || ||||| || |||| Sbjct 4312 AACAACGTTTGATCTTTGCGGGCAAGCAGCTGGAGGATGGACGAACCCTGTCTGATTACA 4253 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 | || || ||||| |||| ||||| | ||||| ||| | | ||||| Sbjct 4252 ATATTCAGAAGGAGTCGACTCTGCACCTTGTGCTCCGTCTTCGTGGCGG 4204 Score = 93.3 bits (102), Expect = 4e-14 Identities = 124/170 (73%), Gaps = 2/170 (1%) Strand=Plus/Minus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324 |||| ||||| ||||||||| |||| || ||| | | ||| | | | | |||| | || Sbjct 5092 TCACTGGCAAGACCATCACCCTCGAGGTGGAGTCTAGCGATACCATCGACAACG-TCAAG 5034 Query 38325 GAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGC 38384 || |||| ||||| ||||| || || | ||||||||||| || |||| || ||| Sbjct 5033 TCGAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAACAGCGTCTTATTTTTGCCGGC 4974 Query 38385 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA 38434 || || || || |||| || || || ||||||||||||||| ||||| Sbjct 4973 AAGCAACTCGAGGACGGTCGGACACTTTCCGACTACAACATCCAGAAGGA 4924 >seq1521 Length=9404 Score = 118 bits (130), Expect = 1e-21 Identities = 199/285 (70%), Gaps = 5/285 (2%) Strand=Plus/Plus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 ||| |||||||| ||| ||| || | || ||||| | ||||||||| ||| || || Sbjct 2446 GTACGTGTCGATCAGGAGCGAGTAAGTCTCGGAGTGAATGTTCTCCATCATGATCTGGAA 2505 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGCTCGACCAGAT 133285 |||||| ||||| || |||||| | ||| ||||| | || ||| ||||| || || | Sbjct 2506 GCCGTAGAAGCAACGGGCCTCGGGAATCTGGACTTCG-GCGCTGAATCGCTCAACGAGGT 2564 Query 133286 TTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGC 133345 | |||||||||||||| || |||||||| || || || | ||| |||||| | Sbjct 2565 TCTCGTTGACGATGCCATCAGAAGCGGCGAAGAATGCAAGGATGTGTGAGATGAAGTACT 2624 Query 133346 GCTCGTTGTC---GTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCT 133402 || | || | | | | ||||||| | |||||||||| || | ||| | Sbjct 2625 TTTCATCATCTGTGAGCTTGTTGTTCCAGTCGTGGAGATCCTTGGACAAATCAATCTCTT 2684 Query 133403 CGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACA 133447 || | ||||| || || |||||||| || |||||||| ||||| Sbjct 2685 CGGCCGTCCAGAATGAGGCCTCGGCCTTCTTGTACATCTGCCACA 2729 >seq755 Length=14903 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||||||||| || |||||| | || || ||| | | | Sbjct 14521 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 14462 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || || |||| ||||| ||||| || ||| | ||||| Sbjct 14461 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 14402 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | || ||||| ||||| || |||| | ||||| |||||||||| Sbjct 14401 CAGCGCTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCAGGACCCTGTCCGACTACAAC 14342 Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| ||| || || || | ||||||||| || | || || Sbjct 14341 ATCCAGAAGGAGAGC-ACCCTCCACCTCGTGCTGCGTCTGCGTGGTGG 14295 >seq127 Length=31638 Score = 111 bits (122), Expect = 2e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || || ||||| ||||||||| | || |||||| || | |||| | Sbjct 19288 TTCGTGAAGACTCTGACTGGCAAGACCATCACCTTGGAGGTCGAGTCCTCGGACACGATC 19229 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || || | ||||| |||||||||||| | ||||||||||| || Sbjct 19228 GACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGAATTCCCCCTGACCAACAGCGTCTT 19169 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | || ||||| |||||||| |||| || || ||| ||||||||||||||| ||| Sbjct 19168 ATCTTTGCTGGCAAGCAGCTGGAGGACGGCCGTACTCTCTCCGACTACAACATCCAGAAG 19109 Query 38433 G 38433 | Sbjct 19108 G 19108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500109621923200