Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001675615.1_202016-06-23] 10,105 sequences; 42,084,471 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1305 269 5e-67 seq1521 131 3e-25 >seq1305 Length=10252 Score = 269 bits (298), Expect = 5e-67 Identities = 872/1331 (66%), Gaps = 51/1331 (4%) Strand=Plus/Minus Query 221366 CCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTCAGGGCA 221425 || ||||| | | ||| ||||| | | || ||| | |||||| ||||| ||| Sbjct 7326 CCCTCGTATGTCGAGTATGGACCCTGCTCCTCTGCCAGCTTGCAAGAGGCAGTCAGAGCA 7267 Query 221426 GCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGGAGAAGTGAA 221484 |||||||||||||||||||||||| |||||||||| || | ||||| ||||| ||| Sbjct 7266 GCGTGGTAGATGGTCTCAAAGATCTTCTTGTTGAGA-TCACGAGCCTCAGGAGACTCGAA 7208 Query 221485 GGGCATACGCAG--CATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGC 221542 |||| ||| || || ||||| |||| ||||| || || || || | |||||| ||| Sbjct 7207 AGGCAGACGGAGTGCAAG-GAAAG-CGTCAGCCAGACCTTGGACGCCCAGACCGATAGGC 7150 Query 221543 CTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCA 221600 ||||| | | ||||| | ||| | || |||| ||||| || ||||||| ||||| | Sbjct 7149 CTGTGGCGCATGTTGCTGTTGCGTGC-CTCCTGG-ACGGGGTAGTAGTTGACTTCGATGA 7092 Query 221601 GATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACA 221660 ||||||||||| || | ||||| | ||||| || |||| Sbjct 7091 TCTTGTTGAGGTTGCGAACAACGACTTGAGTGACCTCATGGAGTTTCT------------ 7044 Query 221661 CCAACTCGC---CGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCA 221717 | || ||| | || | |||| | || || || | || || | | || | Sbjct 7043 CAAAGTCGTATTCACCCTTGTGGTAG---TCGACGAACTGGGGCAGAGCCAGGGAAGCAA 6987 Query 221718 GGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGC 221777 |||| || || || |||||||| | | |||| || ||||| || ||||||||| Sbjct 6986 GGTTGCATACAGCAACCTCGTCAGGGGCAGAGTACTCGATAATCTCCGTGCAGAGGTTGG 6927 Query 221778 TGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG-TCCTTGTAG 221836 || ||||| || |||| || || || |||||| ||| ||| | |||||||| Sbjct 6926 AGCTGCGAATGGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTG-CAGTGATCCTTGTAC 6868 Query 221837 AGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTG 221896 ||||| || || |||||||| ||||||| |||| || || ||| |||| |||| Sbjct 6867 AGCATGAACGGGTTACCAGTCTCAGTCTGAGCCTCCAGGATGGAGTACCAAAGTT-TCTG 6809 Query 221897 GCGCTCACCGTCCTCTTGACTGCACCCT---CGGTCTTTTCATAC--CCGGTATAGAGCA 221951 | || || ||||| ||||| ||| || |||||| | || ||||| Sbjct 6808 GGCCTTGA--TCGTCTTGCG---ACCCTTACCGGCCTGCTCATACTTCTCATACAGAGCC 6754 Query 221952 TGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGAC 222011 | | |||| ||||||||| || | ||||| || ||| | || ||||||| Sbjct 6753 T--CGAACTCTTCACCGTAGCAGTCCGCGAGGCCAGGGCACTCGTTCGGGCACATCAAGG 6696 Query 222012 TCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAA 222071 |||||| ||| | | || | || |||||| || || |||||||| || || | | Sbjct 6695 TCCAGTCGCCGTTTTTCTCAACGCGCTTCATGAACAGATCAGGGATCCAAAGAGCGAGGA 6636 Query 222072 AGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAA 222131 | || || | || || ||||||| |||| ||| ||||| || || | ||||| | Sbjct 6635 ACAGGTCACGGGCACGAATCTCCTCCTTTCCGTGGTTCTTCCTTAGGTCGAGGAACTCGA 6576 Query 222132 AAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCAC 222191 | | || |||||||||||||| || |||| ||| | || ||||| ||||||||||||| Sbjct 6575 AGACATCTGCGTGCCACGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCAC 6516 Query 222192 CCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGG 222251 |||| || || | | |||||| | || || | || || | ||||| | Sbjct 6515 CCTGGTCGACGTAGCGAGCTGTGTTGTTGAACACACGCAGCATGGGAACAATGCCGTTCG 6456 Query 222252 ATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACATGC 222311 | |||||||| || || || | || ||| | | | | | | | | Sbjct 6455 AGGTGCCGTTGGTACCGGCGATATAGGAGCCAGTGGCACGGATGCGATGGACGTTGAGAC 6396 Query 222312 CGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCT 222371 ||||||| || || || ||||||||||| || ||||||| ||||| ||| |||| Sbjct 6395 CGATACCGCCAGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATTCCCT 6336 Query 222372 CCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAAC 222431 | || ||| ||||| | | | ||| || || ||||||| ||||| | | | | Sbjct 6335 CAATGCTGTCGTCCTTCATATCAACCAGGAAGCATGACGACAACTGAGCCTGCGGTGTGC 6276 Query 222432 AGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACG 222491 |||||| || ||||| || ||||||||| ||| | |||||||| || | ||| | Sbjct 6275 CGGCGTTGAAAAGCGTCGGGGAGGCGTGTGTGAAGAATTTGCTAGACATAAGGTTGTAGG 6216 Query 222492 TCTCTACGACTCTGGCGATGTTGTC-CCCGTGA-ATCTGCATGGCGCATCTCATGTACAT 222549 | || | ||||| | |||||||| ||| || | || || || | |||| ||| Sbjct 6215 TTTCGATGACTCGCTCAATGTTGTCACCCCAGATACCTACA--GCAACACGCATGATCAT 6158 Query 222550 GTACTGGGGCCTCTCCACA--GGACCCTTGGAGCTGGAGAGCAGGTACGATTTTTCCAGA 222607 || ||| |||||||| ||| || | ||||| | ||||| || | || ||| Sbjct 6157 GTGCTGTGGCCTCTCGACAATCTTGCCATTGAGCT--TCAATAGGTAAGACCTCTCGAGA 6100 Query 222608 GTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCCAGC 222667 |||||||| || || || | | || || || | | ||| || | || | ||| || Sbjct 6099 GTCTTGAAGCCGAAATATTGGTAGTTGAAATCACGGTCGTAGACAATAGCTGAGTCGAGA 6040 Query 222668 TCCGACTTGTG 222678 ||| |||||| Sbjct 6039 TCCTCCTTGTG 6029 Score = 93.3 bits (102), Expect = 8e-14 Identities = 132/186 (71%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 221065 CATCTCGTCCGTCCATAGACCCCTCTCTTCCAGCACCTTGACCATGTGCTTGTTCACCAC 221124 ||| ||||| | ||| ||||| ||| |||| |||||| || ||| || || Sbjct 7618 CATGTCGTCTGACCACAGACCAAGCTCGACCAGATCCTTGAGCAACCAGGGGTTGACTAC 7559 Query 221125 TTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGATGCT 221184 ||||| || || | ||||| | | ||||| | ||| ||||| | || || | || Sbjct 7558 CTGGAACTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGCTCAAAGCA 7499 Query 221185 CTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCAGACT 221244 |||||||||||| ||||| || | |||||| || || |||||||| || || |||| || Sbjct 7498 CTCGTTGTTGCCAAGGATTTGCGACGTGCTAGCTGTAGGCATGGGGGCAACGAGCAAGCT 7439 Query 221245 GTTGCG 221250 |||||| Sbjct 7438 GTTGCG 7433 >seq1521 Length=9404 Score = 131 bits (144), Expect = 3e-25 Identities = 343/525 (65%), Gaps = 27/525 (5%) Strand=Plus/Minus Query 25810 CCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACG 25869 ||| ||||| | |||||| ||||| ||| |||||||| | | ||| | || Sbjct 2326 CCCTGCATCCGCAAGAAGGCCGACTGGGCTCTGAGGTGGATCACCGACAAGAAGTCAACC 2267 Query 25870 TTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTT 25929 |||| | ||| ||| | || || |||| || ||||| ||||| ||||||||| | ||| Sbjct 2266 TTTGCCACGCGCCTGATCGCTTTCGCTGTCGTCGAGGGTATCTTCTTCAGCGGTGCTTTT 2207 Query 25930 GCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGA 25988 || ||||||||||||||||| || || ||||| || ||| ||||| |||||||| Sbjct 2206 GCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTG-ACTTTCTCCAACGA 2148 Query 25989 GCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCC- 26047 ||||||| | || |||||||| |||| || |||||||| || || | | || || Sbjct 2147 GCTCATCTCGCGTGATGAGGGTCTACACACCGACTTTGCCTGTCTCCTGTTCTCGCTCCT 2088 Query 26048 -----ACTTGCTCCACAA--ACCTTCTCAA-GAGACCGTCTACAGTATCATCAAAGAGGC 26099 || || | |||| | || | || |||| || | || || || Sbjct 2087 GAACAACAGGCCCAACAAGGAGGTTGTGAAGGAGATTGT------TGTC------GATGC 2040 Query 26100 TGTGGAGATCGAGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAA 26159 ||| |||| ||| | ||||||| |||||||||| Sbjct 2039 TGTCAAGATTGAGCAAGAGTTTCTTACGGAGGCGTTGCCCTGCGCCCTCCTGGGCATGAA 1980 Query 26160 CAACAGACTCATGAGCCAATACATTGAGTATGTGGCCGACCATCTGC-TGT-GCCAGCTG 26217 | || || |||| || |||||||||| ||| || ||| || | ||| ||| || Sbjct 1979 CGCCAACCTGATGAAGCAGTACATTGAGTTTGTCGCTGACAGACTTCTTGTCGCC--CTC 1922 Query 26218 GGACTCGCCAGACTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTG 26277 ||| || | ||||| || | | ||||| ||||| |||||||| ||||| || | Sbjct 1921 GGAAACGAGAAGGTCTACCGTGCCACCAACCCATTCGATTTTATGGAGAACATCTCACTC 1862 Query 26278 GAAGGGAAGACCAACTTCTTTGAAAAGAGGGTCGGCGACTATCAA 26322 | || |||||||||||||| || || | || ||||| || ||| Sbjct 1861 GGCGGCAAGACCAACTTCTTCGAGAAACGCGTTGGCGAGTACCAA 1817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928727475291200