Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001675625.1_202016-06-23] 1,787 sequences; 43,625,833 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq1194 127 2e-24 seq1316 118 8e-22 seq1165 95.1 1e-14 >seq1194 Length=144237 Score = 127 bits (140), Expect = 2e-24 Identities = 156/212 (74%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || |||||||||||||| |||||||||||| ||| | |||| || || || Sbjct 102923 GTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTCCTGCCGTCCTCAAGCTG 102982 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || ||||| || ||||| ||||| ||||| || || | ||||||||||||| || || Sbjct 102983 CTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTT 103042 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | |||| | ||||||||| | ||| || ||||||||||| Sbjct 103043 GGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCCGT 103102 Query 45313 CAGAGTCTTCACAAAGATTTGCATG-TTGCCT 45343 || ||||| || ||||| |||||| |||||| Sbjct 103103 GAGGGTCTTGACGAAGATCTGCATGATTGCCT 103134 >seq1316 Length=52382 Score = 118 bits (130), Expect = 8e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||||||||| || ||||| || |||||||||||| ||| ||| | || ||| Sbjct 30947 ACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAGCGTGCGTCCATCCTCC 31006 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 | || ||||| ||||| |||| ||||||||||| ||||| | |||||||||||| Sbjct 31007 AACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCTTGG 31066 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||||| | | |||| | ||| ||||||| || || |||||| Sbjct 31067 ATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACCTCCAACGTGATGGTCTTG 31126 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 ||||||| |||||| || ||||| |||||| Sbjct 31127 CCCGTCAAAGTCTTGACGAAGATCTGCATG 31156 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| || || ||||||||||| || |||||||||||| || ||| |||| || Sbjct 31175 ACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAAAGGGTCCGACCGTCCTCA 31234 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || ||||| ||||| || | || |||||||| ||||| | ||||||||||||| Sbjct 31235 AGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGG 31294 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | | || ||| ||||||| ||||||||||||| Sbjct 31295 ATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTCGACCTCCAAGGTAATCGTCTTG 31354 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || || || || || || || || |||||| Sbjct 31355 CCAGTGAGGGTTTTGACGAAAATCTGCATG 31384 Score = 104 bits (114), Expect = 2e-17 Identities = 131/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || || ||||||||||| |||||||||||| ||| ||| |||| || ||||| Sbjct 31408 GTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGAAAGTGTCCGACCGTCCTCGAGTTG 31467 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || ||||| || || | ||||||||||| ||||| | ||||||||||||| || || Sbjct 31468 CTTGCCGGCAAAAATAAGACGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTT 31527 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | | || | | ||||||||| | ||| || |||||||| || Sbjct 31528 CGACTTGACGTTGTCGATGGTATCGCTAGACTCCACCTCGAGGGTGATGGTCTTGCCAGT 31587 >seq1165 Length=205481 Score = 95.1 bits (104), Expect = 1e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 45147 CCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATA 45206 ||||||| |||||||||||| || || |||| ||||| || || || || || | Sbjct 43225 CCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCCAGCTGCTTGCCAGCAAAGA 43284 Query 45207 TCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCG 45266 | | ||||||||||| || || | |||||||||||| ||| || ||| || Sbjct 43285 TAAGACGCTGTTGGTCAGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGT 43344 Query 45267 CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAA 45326 | | ||||| ||| ||||||| ||| || |||||||| |||||||||||||| | Sbjct 43345 CGATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGAGTCTTCACGA 43404 Query 45327 AG 45328 || Sbjct 43405 AG 43406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395066595632527