Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001675625.1_202016-06-23] 1,787 sequences; 43,625,833 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1316 131 1e-25 seq1194 100 2e-16 seq1165 93.3 4e-14 >seq1316 Length=52382 Score = 131 bits (144), Expect = 1e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || | ||||| ||||| |||| || ||||| ||| | | Sbjct 30927 ATGCAAATCTTCGTCAAGACGCTTACCGGCAAAACCATCACACTCGAAGTTGAATCTTCA 30868 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | ||||| ||| |||||||||||||||||||| || || || ||| Sbjct 30867 GACACAATCGACAACGTCAAATCAAAGATTCAAGACAAGGAGGGTATCCCGCCTGACCAA 30808 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || ||||| ||||| ||| | |||||| || ||| | || |||||||| Sbjct 30807 CAACGTTTGATCTTTGCGGGCAAGCAGCTGGAGGATGGACGAACCCTGTCTGATTACAAT 30748 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| || || || || Sbjct 30747 ATTCAGAAGGAGTCGAC 30731 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || ||||| | || || || ||| | || | || || || || || Sbjct 31383 ATGCAGATTTTCGTCAAAACCCTCACTGGCAAGACGATTACCTTGGAGGTCGAGTCCTCC 31324 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| || | || || || || ||||||||||||||||| || || ||| Sbjct 31323 GATACCATCGACAATGTAAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 31264 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| ||||| || || || || ||| | ||||| || ||| | ||||| |||||| Sbjct 31263 CAACGCCTTATTTTCGCTGGAAAGCAGCTTGAGGACGGTCGGACCCTTTCCGACTACAAC 31204 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 || ||||| || |||| | ||||| || Sbjct 31203 ATCCAAAAGGAGAGCACCCTCCATTTGGT 31175 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||||| || || || || |||| | || || || | | Sbjct 31155 ATGCAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACGTTGGAGGTCGAGTCTTCA 31096 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | ||| || || |||||||||||||||||||| || || ||| Sbjct 31095 GACACGATTGACAATGTTAAATCCAAGATCCAAGACAAGGAGGGTATTCCTCCGGACCAA 31036 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || || || ||||| |||||| ||||| | ||||| |||||| Sbjct 31035 CAGCGACTGATCTTCGCTGGAAAGCAGTTGGAGGATGGACGCACGCTGTCCGACTACAAC 30976 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| ||||| || | || || || |||| |||| || ||| Sbjct 30975 ATCCAAAAGGAATCTACTCTGCACTTGGTCCTGCGTCTGCGTGGTGGT 30928 Score = 95.1 bits (104), Expect = 1e-14 Identities = 121/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| || || ||||| | | ||||||| | ||| | |||| Sbjct 31587 ACTGGCAAGACCATCACCCTCGAGGTGGAGTCTAGCGATACCATCGACAACGTCAAGTCG 31528 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || |||||||||||||| || || || ||||| |||||||| ||||||||||| Sbjct 31527 AAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAACAGCGTCTTATTTTTGCCGGCAAG 31468 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGA 22409 || | ||||| || || | ||||| |||||||| || || || Sbjct 31467 CAACTCGAGGACGGTCGGACACTTTCCGACTACAACATCCAGAAGGA 31421 >seq1194 Length=144237 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| ||||| ||||| | | | Sbjct 103126 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 103067 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || |||| || || || |||||||||||||| || || || || Sbjct 103066 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 103007 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || ||||||||||| ||| | ||||| | | ||| | ||||| |||||| Sbjct 103006 CAGCGCTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCAGGACCCTGTCCGACTACAAC 102947 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || |||| | || | || |||| |||| || ||| Sbjct 102946 ATCCAGAAGGAGAGCACCCTCCACCTCGTGCTGCGTCTGCGTGGTGGT 102899 >seq1165 Length=205481 Score = 93.3 bits (102), Expect = 4e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || ||||| ||||||||||| ||||| || || ||||| |||||||| ||||| ||||| Sbjct 43330 AAGATTCAGGACAAGGAGGGAATTCCCCCTGACCAACAGCGTCTTATCTTTGCTGGCAAG 43271 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 ||| | ||||| ||| || ||||||| |||||||| || || Sbjct 43270 CAGCTGGAGGACGGCCGTACTCTCTCCGACTACAACATCCAGAA 43227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419718858717655