Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001675625.1_202016-06-23] 1,787 sequences; 43,625,833 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1206 168 1e-36 seq1545 147 3e-30 >seq1206 Length=134619 Score = 168 bits (186), Expect = 1e-36 Identities = 455/681 (67%), Gaps = 14/681 (2%) Strand=Plus/Plus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCT-CAGATAGTACATGC 203897 || ||| || ||||||||||| | | |||| | ||||| || ||| |||||||| | Sbjct 30796 CTGGTCGACAGTGAACTGAATCGGCTGGGCGGCTG-CCTGCGTCCGCAGGTAGTACATAC 30854 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957 ||||||| || || || ||| ||| | ||||| || | | |||| || | | | Sbjct 30855 CGGTCTTGAGACCAAGCTTCCAGCCGGTGAAATGCATCGAGGTGATCTTGCCCATGGTCG 30914 Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCG 204016 ||||| |||||| ||||| || |||||| ||||| ||||| ||| || || || ||| Sbjct 30915 GGTCGCGCATGTGGATGTTGAGCGACTGGGACTGGTCAATGAA-GGCACCACGGTCAGCG 30973 Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGGT 204075 ||||| | | | ||| ||||| |||||||| || |||||| | | | ||| |||| Sbjct 30974 GCCATCTGAACGACGGTACGTTGCGAGATCTCCCAAACAGTCTTGTAGAGCTTCT-TGGT 31032 Query 204076 GTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCATCC 204134 | | ||| | || | | || ||| || ||||| ||||| || | | || Sbjct 31033 ATCCTCAGGGATG-CTGGCAATGTTCTGGATGGAGCCTCCCTCGGCGATGATACGGTTCT 31091 Query 204135 TCGTCTCCTCCCCCCACATGCCCAACCT-GATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193 || | || || ||||| | |||| || || ||| ||| | || |||||||| Sbjct 31092 TCATGTCGTCTGACCACA-GACCAAGCTCGACCAGATCCTTGAGCAACCAGGGGTTGACT 31150 Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253 | ||| || || |||| ||||| | || | | | |||| || | || || || Sbjct 31151 ACCTGGAACTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGCTCAAAG 31210 Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313 |||||||||||| | || || | ||||| || || |||||||| || | ||||| | Sbjct 31211 CACTCGTTGTTGCCAAGGATTTGCGACGTGCTAGCTGTAGGCATGGGGGCAACGAGCAAG 31270 Query 204314 GAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCA 204373 |||||| ||||| | || | || || ||| |||| | |||||| || | Sbjct 31271 CTGTTGCGGACACCATGTTGCTTGATGTTGGCCTTGAGAGCGTCCCAGTCC--CAGAGGT 31328 Query 204374 CTG--GGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCT 204431 ||| || || ||| ||||||||| |||| | ||||| || || || |||| Sbjct 31329 CTGAGGGCTTGACGTTCCACATGTCATACTGGAGAATGCCCTGTGAAACAGGAGATCCCT 31388 Query 204432 TGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGAT 204491 ||| |||| || || | ||| |||||||||||||| ||||| | || || | Sbjct 31389 CGTATGTCGAGTATGGACCCTGCTCCTCTGCCAGCTTGCAAGAGGCAGTCAGAGCAGCGT 31448 Query 204492 AGTACATGGTCTCAAAGATCT 204512 ||| |||||||||||||||| Sbjct 31449 GGTAGATGGTCTCAAAGATCT 31469 Score = 107 bits (118), Expect = 3e-18 Identities = 438/678 (65%), Gaps = 28/678 (4%) Strand=Plus/Plus Query 204931 CTGCTGGTTAGACTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTC 204990 || |||||| ||||||||| ||| |||||||||| ||||||||| | || |||| Sbjct 31807 CTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAACGGGTTACCAGTCTC 31866 Query 204991 CATCTGAGATCGCAGAATGTGGGTCCACAATTCGCGAGCCTCCA----CTTGCTTCACGT 205046 |||||| ||| ||| | ||| | || | |||| | ||||| | | | Sbjct 31867 AGTCTGAGCCTCCAGGATGGAGTACCAAAGTTTCTGGGCCTTGATCGTCTTGCGACCCTT 31926 Query 205047 ACATCCCTTGAGACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCA 205106 || ||| ||| || || ||||| ||| | || || |||||| |||| Sbjct 31927 ACCGGCCTG----CTCATACTTCTCATACAGAGCCTCGAACTCTTCACCGTAGCAGTCCG 31982 Query 205107 TCAGCCCTGGACATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTC---ACCC 205163 || || || || | || || ||||||| | ||| | ||| |||| || | Sbjct 31983 CGAGGCCAGGGCACTCGTTCGGGCACATCAAGGTCCAG---TCGCCGTTTTTCTCAACGC 32039 Query 205164 TCTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGT 205223 || ||| ||||| || |||||| || || ||||| |||||||| | ||| | | Sbjct 32040 GCTTCATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGGCACGAATCTCCT 32099 Query 205224 CGTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCT 205282 | | ||| ||||||| | | ||| || || || | | || |||||||||||||| Sbjct 32100 CCTTTCCGTGGTTCTTCCTTAGGTCGAGG-AACTCGAAGACATCTGCGTGCCACGGCTCA 32158 Query 205283 AACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATC 205342 | | | ||| | || || || | |||||| ||||||||||| || ||||| | Sbjct 32159 AGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCTGTG 32218 Query 205343 GCGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATG 205402 |||||| || |||||||| || || | ||||| | ||| ||||| || | | ||| Sbjct 32219 TTGTTGAACACACGCAGCATGGGAACAATGCCGTTCGAGGTGCCGTTGGTACCGGCGATA 32278 Query 205403 GCCGAGCCTTCAGCCCTCACGTTGGAGATGGCCG----CGCCAATCCCGCCAGAACACTT 205458 |||| ||| |||| | ||||| || || || ||||||| ||| Sbjct 32279 TAGGAGC---CAG-TGGCACGGATGCGATGGACGTTGAGACCGATACCGCCAGCCATCTT 32334 Query 205459 GGCGATCTGGGCGC-ACTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCA 205517 || |||| ||| | | ||||| || ||| |||||| || | ||| |||||| || Sbjct 32335 GGAGATCATGGCACAAGTCTTG-AGGGTGTCGTAGATTCCCTCAATGCTGTCGTCCTTCA 32393 Query 205518 GTGTC-ACCAGATAGCACGAAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTG 205576 | || ||||| |||| || | || || || ||||| |||| ||| ||||| Sbjct 32394 -TATCAACCAGGAAGCATGACGACAACTGAGCCTGCGGTGTGCCGGCGTTGAAAAGCGTC 32452 Query 205577 GGGCTGGCGTGGCTGAAG 205594 ||| |||||| ||||| Sbjct 32453 GGGGAGGCGTGTGTGAAG 32470 >seq1545 Length=8904 Score = 147 bits (162), Expect = 3e-30 Identities = 333/498 (67%), Gaps = 11/498 (2%) Strand=Plus/Minus Query 159650 TTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTTC 159709 |||||||| |||||||||||||| | | || || ||||| || |||||||||| Sbjct 7584 TTCTCGAAGAAGTTGGTCTTGCCGCCGAGTGAGATGTTCTCCATAAAATCGAATGGGTTG 7525 Query 159710 TTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTCG 159769 | | | ||| |||| |||||| || | || | ||||| || ||||| || Sbjct 7524 GTGGCACGGTAGACCTTCTCGTTTCCGAGGGCGACAAGAAGTCTGTCAGCGACAAACTCA 7465 Query 159770 ATGTAGCTACA-CATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828 ||||| || | |||| | | ||| || ||||| || ||| | ||| |||| Sbjct 7464 ATGTA-CTGCTTCATCAGGTTGGCGTTCATGCCCAGGAGGGCGCAGGGCAACGCCTCCGT 7406 Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTACCC 159888 |||||||| | |||||||| ||| || ||| ||||||| | ||| || | Sbjct 7405 AAGAAACTCTTGCTCAATCTTGACAGCATCGACAACAATCTCCTTCACAACCTCCTTGTT 7346 Query 159889 CGGCTTGCCCAAAATGT---GGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCC 159945 ||| || ||| || | |||||||| || ||||||||| ||| || || Sbjct 7345 GGGCCTGT------TGTTCAGGAGCGAGAACAGGAGACAGGCAAAGTCGGTGTGTAGACC 7292 Query 159946 CTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTT 160005 ||| || || ||||||| ||||||||| | | || || ||||| | |||||| || Sbjct 7291 CTCATCACGCGAGATGAGCTCGTTGGAGAAAGTCAGACCAGGCATCAGGCCACGCTTCTT 7232 Query 160006 GAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGC 160065 |||||| || |||| |||||||||||||| || ||||| ||||| ||| | || || || Sbjct 7231 GAGCCAGAAGATGGAGGCAAAAGCACCGCTGAAGAAGATACCCTCGACGACAGCGAAAGC 7172 Query 160066 CACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGC 160125 | || | | |||| | | || |||| | ||||||| ||||| || || Sbjct 7171 GATCAGGCGCGTGGCAAAGGTTGACTTCTTGTCGGTGATCCACCTCAGAGCCCAGTCGGC 7112 Query 160126 CTTCTTTGCGATGCACGG 160143 |||||| |||||| || Sbjct 7111 CTTCTTGCGGATGCAGGG 7094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795137438220720