Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001675625.1_202016-06-23] 1,787 sequences; 43,625,833 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq1194 163 2e-35 seq1316 134 1e-26 seq1165 107 1e-18 >seq1194 Length=144237 Score = 163 bits (180), Expect = 2e-35 Identities = 179/234 (76%), Gaps = 8/234 (3%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || | ||| | || ||| ||||| || ||||||||||| ||||||||||| |||| Sbjct 102900 CCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 102959 Query 44171 AGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 || || || |||| || |||||||| |||||||||||||| |||||||| || | | Sbjct 102960 AG--GGTCCTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGG 103017 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286 | | ||| ||||| ||| ||||| ||| || ||| | ||||||||| || || Sbjct 103018 GGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGT--CGATGGTGTCGCTCGACTC 103075 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340 |||||| | || || ||||| |||||||||||||| |||||||| |||||||| Sbjct 103076 CACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGAT 103129 >seq1316 Length=52382 Score = 134 bits (148), Expect = 1e-26 Identities = 158/212 (75%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| || || ||||||||||||||||||||||| |||| || || |||| || Sbjct 31175 ACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAAAGGGTCCGACCGTCCTCA 31234 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || || || | || || || || | ||| | ||| ||||| ||| Sbjct 31235 AGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGG 31294 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 |||||| ||| || ||| | ||||| |||| ||| || ||||||| |||||||||| Sbjct 31295 ATCTTCGACTTTACATTGT--CGATGGTATCGGAGGACTCGACCTCCAAGGTAATCGTCT 31352 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | || |||||||| || ||||| || |||||| Sbjct 31353 TGCCAGTGAGGGTTTTGACGAAAATCTGCATG 31384 Score = 113 bits (124), Expect = 3e-20 Identities = 168/236 (71%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | ||| | || |||| ||| || || ||||||||||||||||| Sbjct 30922 TTGCATACCACCACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTA 30981 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 |||| || ||| | || |||| |||||| || || ||||||| ||||| || || Sbjct 30982 GTCGGACAGCGTGCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTC 31041 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGG 44282 | ||| | ||| ||||| || ||||| | || || || | || ||||| | | Sbjct 31042 CGGAGGAATACCCTCCTTGTCTTGGATCTT-GGATTTAACATTGTCAATCGTGTCTGAAG 31100 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | || ||||||| ||| || ||||| ||||| | ||||| |||||||| |||||| Sbjct 31101 ACTCGACCTCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCATG 31156 Score = 105 bits (116), Expect = 5e-18 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| || || |||||||| ||||||||||| |||| ||| || |||| || Sbjct 31402 CACGAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGAAAGTGTCCGACCGTCCTC 31461 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || ||||| |||||||| || | |||||| || || | ||| | ||| ||||| ||| Sbjct 31462 GAGTTGCTTGCCGGCAAAAATAAGACGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTG 31521 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 |||||| ||| | | | ||||| ||| || |||||||| | || || ||||| Sbjct 31522 GATCTTCGACTTGACGTTGTCGATGGTATCGCTAGACTCCACCTCGAGGGTGATGGTCTT 31581 Query 44308 TCCCGTGA 44315 || |||| Sbjct 31582 GCCAGTGA 31589 Score = 98.7 bits (108), Expect = 7e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| || || |||||| || || |||||||| | || || | || || Sbjct 30718 CACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGACAGGGTTCGTCCATCCTC 30777 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||||||| || |||||||||||||| || || || | || | ||| ||||| || Sbjct 30778 CAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGGGATACCCTCCTTGTCTTG 30837 Query 44248 TATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| || || | ||| | || ||||| | ||||| || || | || || || | Sbjct 30838 AATCTT-TGATTTGACGTTGTCGATTGTGTCTGAAGATTCAACTTCGAGTGTGATGGTTT 30896 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || || ||||| |||||||||||||| Sbjct 30897 TGCCGGTAAGCGTCTTGACGAAGATTTGCAT 30927 >seq1165 Length=205481 Score = 107 bits (118), Expect = 1e-18 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||| ||||||||||| |||| ||| || |||| ||||||||||| || ||||||| Sbjct 43225 CCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCCAGCTGCTTGCCAGCAAAGA 43284 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC 44267 | | |||||| || || | || | || ||||| ||| ||||| ||||| | Sbjct 43285 TAAGACGCTGTTGGTCAGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGT 43344 Query 44268 CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327 | || ||||| | ||| || ||||||| || || ||||| || || || |||||||||| Sbjct 43345 CGATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGAGTCTTCACGA 43404 Query 44328 AG 44329 || Sbjct 43405 AG 43406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359982559746579