Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001936075.1_202017-01-05] 8,554 sequences; 39,336,497 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq7880 125 5e-23 >seq7880 Length=15676 Score = 125 bits (138), Expect = 5e-23 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||||||||| ||||| || || || || || || ||| ||||||| || || Sbjct 10589 ACGAAGACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGACAGGGT 10648 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 ||| ||| || || ||||| || ||||| || | ||||||||| ||||| || || || Sbjct 10649 TCTTCCATCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGGGATACC 10708 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||||||||||||||| |||||| || || || || | | | ||| || Sbjct 10709 CTCCTTGTCTTGAATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAACTTCGAG 10768 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || ||||| ||||| || ||||| ||||| ||||| Sbjct 10769 TGTGATGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTG 10807 Score = 93.3 bits (102), Expect = 3e-13 Identities = 114/153 (75%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 || ||||| ||||||||||| |||||||| |||||||| || |||||||| || |||||| Sbjct 11112 TCCTCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTG 11171 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAAT 480736 || || ||||| || ||| || || ||||| | | | | | ||| |||||| Sbjct 11172 TCCTGGATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTCGACCTCCAA-GGTAAT 11230 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || ||||| || || |||||||| || Sbjct 11231 CGTCTTGCCAGTGAGGGTTTTGACGAAAATCTG 11263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267812277435992