Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001936075.1_202017-01-05] 8,554 sequences; 39,336,497 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq8543 98.7 3e-15 >seq8543 Length=50849 Score = 98.7 bits (108), Expect = 3e-15 Identities = 176/256 (69%), Gaps = 6/256 (2%) Strand=Plus/Plus Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466 || || ||||| || ||| | ||| | ||| | ||||| || | ||| | | || Sbjct 24424 ATCAGCCCACAAATACCACAGATATGCGCCCTGAACGCATCCGAAACCTCAAACAACCTC 24483 Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526 |||| |||| | ||| ||||||| |||||| |||||||| |||||||| |||||| Sbjct 24484 TCCTTCAAGAAGGAGGCTGCTCCGTGTGCAATCATGCAATCACGTTCCATTTCTCCGAAA 24543 Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAG---TGAGATTAACCATA 251583 || ||||||||||| || || | |||||| | ||||| | | ||| || || Sbjct 24544 CGCAGACCACCATCACGCGCACGACCCTCCACTGGCTGTCTTGTCATGATGTTGAC---G 24600 Query 251584 GGACCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAAT 251643 ||||| | ||| || |||||| | ||||| ||| | |||||||||||| || Sbjct 24601 GGACCACGTGCTCGGGCGTGAATCTTATCGTCCACCATGTGCCTCAGACGCTGGTAGTAT 24660 Query 251644 GCGGGACCGATGAAGA 251659 | || || | ||||| Sbjct 24661 GTCGGTCCAAAGAAGA 24676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471656291550698