Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001936075.1_202017-01-05] 8,554 sequences; 39,336,497 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq7023 145 9e-29 seq7115 134 2e-25 seq8210 105 8e-17 seq8313 98.7 1e-14 seq8069 96.9 4e-14 seq8459 95.1 1e-13 seq8135 93.3 5e-13 >seq7023 Length=8265 Score = 145 bits (160), Expect = 9e-29 Identities = 187/258 (72%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 ||||||||||||||| || |||| ||| || || || |||||||| || | |||||| || Sbjct 5590 CTGGTCGACGTAGCGAGCTGTGTTGTTGAACACACGCAGCATGGGAACAATGCCGTTCGA 5531 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 ||||||||| || || | |||| ||| | ||| || | || || | || Sbjct 5530 GGTGCCGTTGGTACCGGCGATATAGGAGCCAGTGGCACGGATGCGATGGACGTTGAGACC 5471 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 ||| ||||| ||| ||||||||| | || || ||||| ||||||||||| ||||| Sbjct 5470 GATACCGCCAGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATTCCCTC 5411 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || |||| ||||||| || || || ||||| ||||| || | |||| ||||| Sbjct 5410 AATGCTGTCGTCCTTCATATCAACCAGGAAGCATGACGACAACTGAGCCTGCGGTGTGCC 5351 Query 1630305 GGCGTTGAAGAGCGTGGG 1630322 ||||||||| ||||| || Sbjct 5350 GGCGTTGAAAAGCGTCGG 5333 Score = 98.7 bits (108), Expect = 1e-14 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 1628374 CCGTAGCACTCGTGCAGGCCGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCG 1628433 |||||||| || ||||| || |||| ||| || | | | ||||||||| Sbjct 5817 CCGTAGCAGTCCGCGAGGCCAGGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCCGTTT 5758 Query 1628434 GTCACCGCGCGGCGCATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCC 1628493 || | |||| ||| || || ||| |||| || ||| || ||||| || || Sbjct 5757 TTCTCAACGCGCTTCATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGGCA 5698 Query 1628494 CGGTTCTCCTCCTTGCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGC 1628553 || |||||||||| ||||||||||| | |||||||| | |||| | || |||||| Sbjct 5697 CGAATCTCCTCCTTTCCGTGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGCGTGC 5638 Query 1628554 CACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 1628600 |||||||| |||||| ||||||||| || ||||||| ||| || Sbjct 5637 CACGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCACC 5591 >seq7115 Length=8802 Score = 134 bits (148), Expect = 2e-25 Identities = 217/311 (70%), Gaps = 1/311 (0%) Strand=Plus/Minus Query 868699 GTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 868758 ||||||||| ||||| |||||| |||||||||||||| |||| ||||| |||||| Sbjct 7615 GTACTCGCCAACGCGTTTCTCGAAGAAGTTGGTCTTGCCGCCGAGTGAGATGTTCTCCAT 7556 Query 868759 CCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCG 868818 | ||| ||||||| | |||| ||| ||| ||| || | | || || | Sbjct 7555 AAAATCGAATGGGTTGGTGGCACGGTAGACCTTCTCGTTTCCCAGGGCGACAAGAAGTCT 7496 Query 868819 GTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCAC 868878 ||| ||||||||||| |||||||| ||| ||| |||||||||||| | ||| || Sbjct 7495 GTCAGCGACAAACTCAATGTACTGCTTCATCAGGTTGGCGTTCATGCCCAGGAGGGCGCA 7436 Query 868879 CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGATCTGCCT 868938 |||| || ||| | | |||||||| ||| |||| ||| || ||||| | |||| | | Sbjct 7435 GGGCAACGCCTCCGTAAGAAACTCTTGCTCAATCTTGACAGCATCGACAACAATCTCCTT 7376 Query 868939 GGGCACGTCGGCCGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCGCA 868998 || || |||| ||||| || | || | | || || |||||||||||| Sbjct 7375 CACAACCTCCTTGTTGGGCCTGTTGTTCAGGAGCGAGAACAGGAGACAGGCAAAGTCGGT 7316 Query 868999 GTGCA-ACCCT 869008 ||| | ||||| Sbjct 7315 GTGTAGACCCT 7305 Score = 95.1 bits (104), Expect = 1e-13 Identities = 117/158 (74%), Gaps = 9/158 (6%) Strand=Plus/Minus Query 869216 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAA 869275 || || ||||| ||||| |||||||||||||| ||||||| | ||| || ||| Sbjct 7272 AGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAAGCACCGCTGAAG 7213 Query 869276 AAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCC 869335 ||||| ||||||||| | || || |||| || ||| ||||||| || || || | Sbjct 7212 AAGATACCCTCGACGACAGCGAAAGCGATCAGGCGCGTGGCAAAG--GTTGA----CTTC 7159 Query 869336 TTGT---TGATCCACTTCATCGCCCAGTCGGCCTTTTT 869370 |||| |||||||| ||| |||||||||||||| || Sbjct 7158 TTGTCGGTGATCCACCTCAGAGCCCAGTCGGCCTTCTT 7121 >seq8210 Length=21781 Score = 105 bits (116), Expect = 8e-17 Identities = 266/402 (66%), Gaps = 8/402 (2%) Strand=Plus/Plus Query 18088 GTCACCACCTTTGGCGAGTCGCACGGGGCGGGCG-TCGGCTGCATCATCGACGGCGTGCC 18146 || ||||||| ||||||||| ||| | || || | || ||||| |||| || || Sbjct 20376 GTAACCACCTATGGCGAGTCACACTGC-CGCTCGGTGGGATGCATTGTCGATGGATGCCC 20434 Query 18147 GCCGTGCATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGG 18206 ||| |||||| | || ||||||||||||||||||| || || | || | ||||| || Sbjct 20435 GCCAGGCATGCAATTGACCGAGGCCGACATCCAGCCACACATGAACAGGAGGCGACCTGG 20494 Query 18207 CCAGGGCGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCAC 18266 ||| || | | ||||| ||||| ||| || ||| |||||||||||||| Sbjct 20495 ACAGTCCGATATCACAACGCCCCGCAATGAGGAGGACAAGGTCGAGATCCAGTCGGGCAC 20554 Query 18267 GGAGAACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCG 18326 ||| |||| ||||| | ||| | || | ||| | || ||| |||||| | Sbjct 20555 CGAGTTCGGCATCACGTTGGGCACCCCGATTGGCATGCGCGTCATGAACAAGGACCAGAG 20614 Query 18327 GCC------CGTCGACTATTCCGACATGTGCAAGGTGCCGCGGCCCTCACACGCCGACTA 18380 ||| | || | | ||| ||| || | | || || ||| ||||| || | Sbjct 20615 GCCAAAGGACTACGGCAACTCCACTATGGACAGGTTCCCCCGACCCAGCCACGCTGATTG 20674 Query 18381 CACCTACATGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCG 18440 || ||| | | ||||||||| |||||||| ||||| ||| || ||||| Sbjct 20675 GACATACCTCGAGAAGTACGGCGTCAAGGCGAGCAGTGGCGGCGGCAGGAGCAGCGCCCG 20734 Query 18441 CGAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482 |||||| | || ||||| ||||| || |||||||||| Sbjct 20735 TGAGACCATTGGCCGAGTCGCAGCCGGTGCCATCGCCGAGAA 20776 Score = 89.7 bits (98), Expect = 6e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||||||| || || || || || ||||| | ||| ||||||| |||||| Sbjct 21012 GACAGCATCGGAGGTACTGTTCACTGTGTCATCCGCAATGCGCCATCAGGCCTGGGCGAG 21071 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| |||||| | |||||| ||| | || || |||||| || || ||||| Sbjct 21072 CCTTGCTTCGACAAGTTGGAGGCCAAGCTGGGGCATGCTATGCTGAGCATTCCTGCCACA 21131 Query 19167 AAGGGATTCGAGATTGG 19183 ||||| ||||||||||| Sbjct 21132 AAGGGTTTCGAGATTGG 21148 >seq8313 Length=25797 Score = 98.7 bits (108), Expect = 1e-14 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 1592191 CAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGAT 1592250 ||||||||| || || ||||| || || || |||| ||||| | || || || ||||| Sbjct 4107 CAACTACCTTGATATTAAGCCGCTACTTGACGTTGGTTGCAAAACGGTTGCAAATATGAT 4048 Query 1592251 CAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294 |||||||||||| || |||||||| |||||||| || ||||||| Sbjct 4047 CAAGGGCAAGTCCCCAGAGGAGATTCGCAAGACTTTCAACATCA 4004 >seq8069 Length=18775 Score = 96.9 bits (106), Expect = 4e-14 Identities = 135/189 (71%), Gaps = 3/189 (2%) Strand=Plus/Plus Query 1726966 GTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGAC 1727025 ||||| ||||||||| || ||| |||||||| || || || || | |||||||||| Sbjct 5945 GTCGATATCGGGGTCGTTGATCAGACCCTTCCAGCCCACCGTGGTCCTGGGCTTTTCGAG 6004 Query 1727026 ATAGGCGCGCATGACCACGCAAAGCGCGTCGCCGACCTCGTCTCGGACAAAGGCGCGCAG 1727085 ||||||||||| || | ||| || | || || || ||| | | | ||| || Sbjct 6005 GTAGGCGCGCATAACGATGCAGAGGTCATCTGAGAGCTTGTC---GGCCAGGGCCTTGAG 6061 Query 1727086 GCGTCGGCCATAGTCGACGACGGCCGCCGGGTCGTGCGCCGAACACGGACCAACGATAAC 1727145 |||| ||| || |||| | | || ||||||||||| ||| || || ||||||||||| Sbjct 6062 GCGTTGGCAGTATTCGAGGGCCGCTGCCGGGTCGTGAATCGAGCAGGGTCCAACGATAAC 6121 Query 1727146 CAGCAGCCG 1727154 || || || Sbjct 6122 GAGAAGGCG 6130 >seq8459 Length=33900 Score = 95.1 bits (104), Expect = 1e-13 Identities = 101/131 (77%), Gaps = 2/131 (2%) Strand=Plus/Plus Query 1726698 CGGCGCGCACGGCGTCGAGTGCCGTCGCCACGC-TCCCGTCGGTGCCGTTCTTGAAGCCG 1726756 |||||| | ||||||| || || |||| | | |||||||||||||||||||||||| Sbjct 29285 CGGCGCCGATAGCGTCGA-TGGCGACGCCCAGTGTGCCGTCGGTGCCGTTCTTGAAGCCG 29343 Query 1726757 ATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCGGTCGTGCGCGCG 1726816 | || | || || | || |||| ||||||||| | |||||||||||| ||||| || Sbjct 29344 ACGGGGAACGATAGGCCAGAGGCCAGCTCGCGGTGAAGCTGGCTCTCGGTGGTGCGGGCA 29403 Query 1726817 CCCACGGCGCC 1726827 || || ||||| Sbjct 29404 CCGACTGCGCC 29414 >seq8135 Length=20025 Score = 93.3 bits (102), Expect = 5e-13 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 1574058 CTGCCGCCCGGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCG 1574117 || ||||| || || || ||| || | || || |||||||||||| || | || || | Sbjct 8637 CTCCCGCCAGGCCGACATAAGCTGGTGATTCTTGACGAGGCCGACAGCATGACATCTGGC 8578 Query 1574118 GCCCAGCAGGCCCTGCGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTG 1574177 || |||||||||||| || || ||||| | || ||||||| ||| | || || | Sbjct 8577 GCACAGCAGGCCCTGAGGCGAACGATGGAGATCTACTCCAACACTACGAGATTCGCTTTC 8518 Query 1574178 GCGTGCAACACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGCGCCATTCTGCGC 1574237 ||||||||| ||| | |||| ||| |||| || ||| ||||| || || || Sbjct 8517 GCGTGCAACCAGTCAAACAAAATCATAGAGCCCCTGCAGTCTCGATGCGCAATCCTCCGG 8458 Query 1574238 TTTGTGCGCCTGGGTGACGCCCAG 1574261 | | ||||||| ||||||||| Sbjct 8457 TACGCGCGCCTGACGGACGCCCAG 8434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106437218701618