Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001936075.1_202017-01-05] 8,554 sequences; 39,336,497 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq7880 179 9e-40 seq7065 122 2e-22 seq1356 100 7e-16 >seq7880 Length=15676 Score = 179 bits (198), Expect = 9e-40 Identities = 173/222 (78%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | |||||| | ||| ||||| ||||| ||||||| ||||| |||| || || Sbjct 10817 ACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAGCGT 10876 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || | |||||| ||||||||||| ||||| |||||||| || |||||||| Sbjct 10877 GCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGAATACC 10936 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||||||||| || ||| || || |||||||| | || || || || Sbjct 10937 CTCCTTGTCTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACCTCCAA 10996 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||| ||||||||||||||||| || | ||| | ||||| Sbjct 10997 CGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 11038 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || |||||||| ||||| || || || || | ||||||||| | || || Sbjct 10589 ACGAAGACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGACAGGGT 10648 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 ||| ||||| || |||||||| || || ||||| | ||||||||||| ||||| ||||| Sbjct 10649 TCTTCCATCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGGGATACC 10708 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||| |||||| || || ||||| |||||||| | ||| || || | Sbjct 10709 CTCCTTGTCTTGAATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAACTTCGAG 10768 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || ||||| || | || || | ||| | |||||| Sbjct 10769 TGTGATGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 10810 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | ||||| ||| || ||||||| ||||| |||| | || | || || Sbjct 11055 AGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAAAGGGTCCGACCGTCC 11114 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| |||||||| ||||| ||||||||||| || |||||||| |||||||| Sbjct 11115 TCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTGTCC 11174 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| |||||||| || |||| || || || || || |||||| Sbjct 11175 TGGATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTCGACCTCCAAGGTAATCGTC 11234 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | ||||| | ||| | ||||| Sbjct 11235 TTGCCAGTGAGGGTTTTGACGAAAATCTGCAT 11266 Score = 96.9 bits (106), Expect = 8e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||||||||| || || |||| ||||| |||| | || | || || Sbjct 11283 AGCACGAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGAAAGTGTCCGACCGTCC 11342 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| || || || ||||| || |||||||| || || ||||| |||||||| Sbjct 11343 TCGAGTTGCTTGCCGGCAAAAATAAGACGCTGTTGGTCCGGAGGGATACCCTCCTTGTCC 11402 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || |||||||| || | ||||| || | ||||| ||| Sbjct 11403 TGGATCTTCGACTTGACGTTGTCGATGGTATCGCTAGACTCCACCTCGAGGGTGATGGTC 11462 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 11463 TTGCCAGT 11470 >seq7065 Length=8542 Score = 122 bits (134), Expect = 2e-22 Identities = 160/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || |||||||| ||| || || |||| ||||| |||| || || Sbjct 4756 ACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGT 4697 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || || || || |||||||| || || ||||| | || || ||||| || || ||||| Sbjct 4696 CCTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACC 4637 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| ||| ||||||||||| | ||||| || | Sbjct 4636 CTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAG 4577 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||||||||| | || || | ||| | ||||| Sbjct 4576 GGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 4535 >seq1356 Length=292 Score = 100 bits (110), Expect = 7e-16 Identities = 99/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 7591 ATGATTTTCTTTTTTGTTATGCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCT 7650 |||||||| || | |||||||| | | | ||||| ||||| || |||| || | ||| Sbjct 283 ATGATTTTTTTCATGGTTATGCCAGCTTTAATAGGTGGTTTTGGTAATTTCTTAATGCCT 224 Query 7651 TTAATGATTGGTGCTCCTGATATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTA 7710 |||||||| || | ||||||||||| || || || || || ||||| |||||||||||| Sbjct 223 TTAATGATAGGAGGGCCTGATATGGCATTCCCTAGACTAAATAATATTAGTTTTTGATTA 164 Query 7711 CTACCGCC 7718 |||| || Sbjct 163 TTACCACC 156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192400500816476