Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001936075.1_202017-01-05] 8,554 sequences; 39,336,497 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq7065 174 1e-38 seq7880 150 2e-31 seq8290 109 5e-19 seq6578 84.2 2e-11 >seq7065 Length=8542 Score = 174 bits (192), Expect = 1e-38 Identities = 180/234 (77%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 ||| || || || ||||| | ||| || || || |||||||||||||| ||||| ||||| Sbjct 4765 ACCACCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTC 4706 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751 ||| ||||| | |||| || |||||||||||||| || |||| |||||| ||||||| Sbjct 4705 GGACAGGGTCCTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGG 4646 Query 41752 GGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGAC 41809 ||| | | |||||||||| ||| || ||| || | || | |||||||||||| Sbjct 4645 GGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG--ATGGTGTCGCTCGAC 4588 Query 41810 TCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||||||| | || || || || ||||| || ||||| ||||| ||||||||| Sbjct 4587 TCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 4534 >seq7880 Length=15676 Score = 150 bits (166), Expect = 2e-31 Identities = 173/231 (75%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | |||| ||| || ||||||||||| || ||||| |||||||| Sbjct 11039 GCCACCACGGAGACGAAGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGA 11098 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||| || |||| || |||||||| || ||||| || ||||| |||||||||| || Sbjct 11099 AAGGGTCCGACCGTCCTCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGG 11158 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCC 41812 || | |||||||||| ||| || ||| || | || | || ||| ||||| Sbjct 11159 AATACCCTCCTTGTCCTGGATCTTCGACTTTACATTGTCG--ATGGTATCGGAGGACTCG 11216 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||||| || ||||| || || || || || || ||||||||||||||| Sbjct 11217 ACCTCCAAGGTAATCGTCTTGCCAGTGAGGGTTTTGACGAAAATCTGCATG 11267 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| ||||| || ||||| || ||||| |||||||| Sbjct 10812 CCACCACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 10871 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || | |||||| || ||||| ||||| ||||||||||||| ||| Sbjct 10872 AGCGTGCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGA 10931 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||| | || | || | || ||| | | | ||||| ||||| || Sbjct 10932 ATACCCTCCTTGT-CTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGAC 10990 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| ||| || || || ||||||| ||||| ||||| ||||||||| Sbjct 10991 CTCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCATG 11039 Score = 120 bits (132), Expect = 3e-22 Identities = 151/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | ||| || || || || ||||||||||| ||||| |||||||| Sbjct 11267 GCCACCACGGAGGCGGAGCACGAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGA 11326 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || || || |||| ||||| ||||||||||| || || || ||||||||||||| || Sbjct 11327 AAGTGTCCGACCGTCCTCGAGTTGCTTGCCGGCAAAAATAAGACGCTGTTGGTCCGGAGG 11386 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | |||||||||| ||| || ||| ||| | | | || ||||| ||||||| Sbjct 11387 GATACCCTCCTTGTCCTGGATCTTCGACTT-GACGTTGTCGATGGTATCGCTAGACTCCA 11445 Query 41814 CCTCCACCGTTATCGTTTTACCCGT 41838 |||| | || || || || || || Sbjct 11446 CCTCGAGGGTGATGGTCTTGCCAGT 11470 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || ||||| | ||| || ||||| || |||||||||||| || || || || Sbjct 10584 CCGCCACGAAGACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGAC 10643 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| | | || || ||||||||||| || || |||| || |||||||| | || Sbjct 10644 AGGGTTCTTCCATCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGGG 10703 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||| | ||| | |||| || ||| | | | ||||| || || || Sbjct 10704 ATACCCTCCTTGT-CTTGAATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAAC 10762 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || || ||||| || || |||||||| ||||| || ||||| Sbjct 10763 TTCGAGTGTGATGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 10810 >seq8290 Length=24323 Score = 109 bits (120), Expect = 5e-19 Identities = 137/183 (75%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| ||||||||||| || || |||| || | ||||||||| || || | Sbjct 18413 CCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCCAACTGCTTGCCAGCAAAGA 18472 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGAC 41791 | || ||||||||||| | ||||| | |||||||||| ||| | || | |||| || Sbjct 18473 TAAGACGCTGTTGGTCAGGGGGAATTCCCTCCTTGTCC-TGAATCTTGGACTTC-ACATT 18530 Query 41792 GAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 | | | ||||| ||||| ||||||| || || || || || ||||| ||||| || Sbjct 18531 GTCGATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGAGTCTTCAC 18590 Query 41851 GAA 41853 ||| Sbjct 18591 GAA 18593 >seq6578 Length=5977 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 85799 TCGTATCGCACCTCGTTCCGGCCTCGCCAGCAAGCACGGTATCGACGTGGGCGCCGGGGT 85858 |||||||||||| || ||||| ||||| ||| ||| |||||| |||||||| || Sbjct 3519 TCGTATCGCACCCCGCTCCGGTCTCGCGGCCAAACACTTCATCGACACCGGCGCCGGCGT 3578 Query 85859 CATCGACGCCGACTACCGCGGAAACGTCATCATCGTACTCTTCAACCACGGCGA 85912 ||| || |||||||||||||| | |||| || | | |||||||||| ||| Sbjct 3579 CATTGATGCCGACTACCGCGGTCAGGTCAAGGTCCTGTTGTTCAACCACGCCGA 3632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462254568144800