Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001936435.1_202017-01-05] 7,631 sequences; 38,751,292 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq7559 98.7 8e-16 >seq7559 Length=42622 Score = 98.7 bits (108), Expect = 8e-16 Identities = 121/163 (74%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 20931 TCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTC 20990 || ||||||| | ||| ||||| || || |||| | |||| | | |||||| | Sbjct 21763 TCGACGTGGTCGGCGTAGACGTGAGCATCGCCCATGACGTGCGTCA-GCGACCCGGGCAC 21705 Query 20991 -AGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGG 21049 || |||||| | | || |||| | |||||| || ||||||||||| ||||| || || Sbjct 21704 TAGACCCGTGGCACGCGCAATCATGTGCGTCAGCAGTGCGTAGCTGGCAATGTTGAAGGG 21645 Query 21050 GACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAG 21092 || || |||||||||||| ||||| |||||| ||||||||| Sbjct 21644 CACGCCTAGGCCCATGTCGCAGGACCGCTGGTAGAGCTGGCAG 21602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427736215628880