Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001936435.1_202017-01-05]
7,631 sequences; 38,751,292 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq6159 172 7e-38
>seq6159
Length=8254
Score = 172 bits (190), Expect = 7e-38
Identities = 446/672 (66%), Gaps = 22/672 (3%)
Strand=Plus/Minus
Query 113565 TGAACTGAATGGGTCT---CGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGA 113621
|||||||||| || || || || |||| | || ||||||||||| || |||||||
Sbjct 6962 TGAACTGAATCGG-CTGGGCGGCT--GCCTGCGTCCGCAGGTAGTACATGCCGGTCTTGA 6906
Query 113622 GCCCCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCA 113681
| || |||||||| | | ||||||||||| | |||| | || || ||
Sbjct 6905 GACCAAGCTTCCAGCCGGTGAAATGCATCGAGGTGATCTTGCCCATGGTCGGGTCGCGCA 6846
Query 113682 TGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAA 113741
|| || ||| | ||||| || || |||||| ||||| || || ||||| | ||
Sbjct 6845 TGTGGATGTTGAGCGACTGGGACTGGTCAATGAAGGCACCACGGTCAGCGGCCATCTGAA 6786
Query 113742 TCACA-TCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGG 113800
|| | | | | ||| ||||| ||||| ||||||| ||||| |||| || |||
Sbjct 6785 CGACGGTACGTTG-CGAGATCTCCCAAACAGTCTTGTAGAGCTTCTTGGTATCCTCAGGG 6727
Query 113801 ATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTT 113860
|| | || || ||||||||||| ||| | || || | | |||||| || | |
Sbjct 6726 ATGCTGGCAATGTTCTGGATGGAGCCTCCCTCGGCGATGATACGGTTCTTCATGTCGTCT 6667
Query 113861 GACCAGAGACCAATCTTTTTGAGATCCT----CCACGAGATGCTTATTGACAACAACAAA 113916
||||| ||||||| || ||||||| | || || | ||||| || ||
Sbjct 6666 GACCACAGACCAAGCTCGACCAGATCCTTGAGCAACCAGGGG----TTGACTACCTGGAA 6611
Query 113917 CTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATT 113976
||| || || || || | | || || |||| || || |||||||||||||| ||
Sbjct 6610 CTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGCTCAAAGCACTCGTT 6551
Query 113977 GTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACG 114036
||| || | |||||| | ||| ||||| |||||||| || | ||| | |||||| ||
Sbjct 6550 GTTGCCAAGGATTTGTGACGTGCTAGCTGTAGGCATGGGGGCAACGAGCAAGCTGTTGCG 6491
Query 114037 GAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTT---GT 114093
|| ||| | || | | ||| ||||||| ||||||||||| | ||| | | |
Sbjct 6490 GACACCATGTTGCTTGATGTTGGCCTTGAGAGCGTCCCAGTCCCA---GAGGTCTGAAGG 6434
Query 114094 CTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGT 114153
|| | | |||||| || ||||||| || || || || | || |||||||| ||||
Sbjct 6433 CTTGACGTTCCACATGTCGTACTGGAGAATTCCCTGTGAAACAGGAGATCCCTCGTATGT 6374
Query 114154 CTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACAT 114213
| |||||| |||| |||| || | | | | || || || ||||| || ||
Sbjct 6373 CGAGTATGGACCCTGCTCCTCTGCAAGCTTGCAAGAGGCAGTCAGAGCAGCGTGGTAGAT 6314
Query 114214 TGTCTCAAAAAT 114225
|||||||| ||
Sbjct 6313 GGTCTCAAAGAT 6302
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597296619933480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |