Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001936435.1_202017-01-05] 7,631 sequences; 38,751,292 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq7372 264 1e-65 seq6662 122 1e-22 >seq7372 Length=27696 Score = 264 bits (292), Expect = 1e-65 Identities = 435/626 (69%), Gaps = 6/626 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||||||||| || || || ||||| | ||||| || |||||||| Sbjct 17656 TCAAAGTCCTCACCACCCAAGTGGGTGTCACCAGCGGTGGACTTGACCTCGAAGATACCC 17715 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | | | ||| ||||| || ||||||||||| || || ||||| || ||| Sbjct 17716 TCCTCAATGGTAAGGAGCGACACATCGAAAGTACCACCACCAAGATCGAAAATAAGCACG 17775 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || || | || ||||| || |||||||| ||||| || || || || || || Sbjct 17776 TTGCGCTCACCCTCGACCTTCTTGTCAAGACCGTAGGCGATGGCGGCGGCAGTAGGCTCG 17835 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || ||||| || |||||| |||||||| | ||||| || || || || || Sbjct 17836 TTGATGATACGGAGGACGTTCAGACCAGCAATGAGACCGGCATCCTTGGTAGCCTGACGC 17895 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 ||||| ||||| |||||||| ||||| || ||||| |||| |||| | ||| || Sbjct 17896 TGCGAGTCGTTGAAGTAGGCGGGGACGGTGACGACAGCGTTGTTGACGGTGCCACCAAGG 17955 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || || || || | || ||| ||||| | ||||| ||||| ||||| |||| | Sbjct 17956 TAAGACTCAGCAGTCTCACGCATCTTGGTCAAGACCATGGATGAGATCTCCTCAGGAGTG 18015 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876 ||||| || | || || || || || || ||||| | || || ||| | | Sbjct 18016 AACTGCTTTGACTCTCCCTTGAACTCGACCTCAATGACAGGCTT---GCCAGACCTCTCG 18072 Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936 | ||||| | | | | ||||| ||| | ||||||| ||| || ||||| | Sbjct 18073 ACGACCTTGAAGGGGAAGTGCTTCATGTCGGCCTGGACCTCAGCGTCGGAGAACTTGCGA 18132 Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 || || | | ||| || || || || ||||| | ||||||||| || |||||||| Sbjct 18133 CCAATCAACCTCTTCGCGTCGAAGACGGTGTTGTGGGGGTTCATAGCGACCTGGTTCTTG 18192 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 ||||| || ||||| ||||| || || ||||| ||||| ||| | || ||||| ||| Sbjct 18193 GCCGCATCTCCGATCAGACGCTCGGTA---TCCGTGAACGCCACGAAGGACGGGGTTGTT 18249 Query 8057 CGATTCCCTTGGTCGTTCGCAATAAT 8082 || || || ||||| || || ||||| Sbjct 18250 CGGTTACCCTGGTCATTGGCGATAAT 18275 >seq6662 Length=12713 Score = 122 bits (134), Expect = 1e-22 Identities = 324/492 (66%), Gaps = 6/492 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||| | ||| || || || ||||| || ||| || || | ||| Sbjct 2015 TCGAAATCCTCACCACCAAGGTGGGTGTCACCGGCGGTGGCCAGGACCTCGAAAACACCG 1956 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || || | | ||||| || || || |||||||||||||| | | || | Sbjct 1955 TTGTCGATCGAAAGGAGGGAAACGTCGAAGGTGCCACCACCCAGGTCGTACACGATGATC 1896 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 | | || ||| | | |||| || || |||||||| | ||| || ||||| || || Sbjct 1895 TGGTTCTCCTCGCC---GGTCTTGTCCAGGCCGTACGCCAAAGCGGCAGCCGTGGGCTCG 1839 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 |||| |||||||||| ||| || || |||||| | || || || ||||| || | Sbjct 1838 TTAACAATACGAAGAACGTTGAGACCGGCAATAACACCGGCGTCCTTTGTCGCCTGCCTC 1779 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || ||||| ||||| || || || || ||||| |||| || || ||||| || | Sbjct 1778 TGGTTGTCGTTGAAGTACGCGGGAACGGTGACGACGGCGTGGGTAACCTTCTTGCCCAAG 1719 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || | || || | || ||||| ||| | | ||| | || | ||| || | | Sbjct 1718 TAGGCCTCGGCAACCTCCTTCATCTTGCCCAAGATCATGGCCGAGACCTCCTCGGGGGTG 1659 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876 ||||| || || ||||| || | ||| || || | ||| || ||| | | | Sbjct 1658 AACTGCTTGGTCTCACCCTTGACATCGACCGAAACAACGGGCTT-TCCTC--CCTTGTTC 1602 Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936 | |||||| || | | | || ||||| | ||||| | | ||||| |||||| | Sbjct 1601 ACAACCTTGTAGGGGAAGTGCTTGATATCTTGCTGGACATCCTTGTCCGTAAACTTGCGA 1542 Query 7937 CCGATAAGACGC 7948 |||||||||||| Sbjct 1541 CCGATAAGACGC 1530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635072216270040