Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001936935.1_202017-01-05] 41,689 sequences; 39,881,187 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq26053 266 3e-66 seq35528 140 3e-28 >seq26053 Length=873 Score = 266 bits (294), Expect = 3e-66 Identities = 519/764 (68%), Gaps = 2/764 (0%) Strand=Plus/Plus Query 23118 TCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGA 23177 |||||||||| || || ||||| ||||||||| |||||| |||| | || ||||| Sbjct 70 TCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAACGGGTTACCAGTCTCAG 129 Query 23178 CCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTACCTG- 23236 ||| | ||| | ||| | ||| | |||| || | | |||| || ||| Sbjct 130 TCTGAGCCTCCAGGATGGAGTACCAAAGTTTCTGGGCCTTGAT-CGTCTTGCGACCCTTA 188 Query 23237 CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGG 23296 || | | ||| ||||| | |||| || || || || ||||||| ||||| || ||| Sbjct 189 CCGGCCTGCTCATACTTCTCATACAGAGCCTCGAACTCTTCACCGTAGCAGTCCGCGAGG 248 Query 23297 CCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATA 23356 || || | | |||| ||||| | |||| || || |||||||| |||| Sbjct 249 CCAGGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCCGTTTTTCTCAACGCGCTTCATG 308 Query 23357 AAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCG 23416 || ||||| || ||||| |||||| |||||| || ||||| || | |||||| || ||| Sbjct 309 AACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGGCACGAATCTCCTCCTTTCCG 368 Query 23417 GTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACG 23476 |||||| | | || | || || || || || || ||||||||||| ||||| | | Sbjct 369 TGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGCGTGCCACGGCTCAAGGTAGATG 428 Query 23477 GCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTAC 23536 ||||| || || || | ||| ||||| ||||| |||||||| || || ||||||||| || Sbjct 429 GCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCTGTGTTGTTGAAC 488 Query 23537 ACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCT 23596 || | ||||| || || | ||||| || | |||| || || | | || || Sbjct 489 ACACGCAGCATGGGAACAATGCCGTTCGAGGTGCCGTTGGTACCGGCGATATAGGAGCCA 548 Query 23597 TTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCG 23656 | || || | | || |||| || ||| || || || || || || ||||| || Sbjct 549 GTGGCACGGATGCGATGGACGTTGAGACCGATACCGCCAGCCATCTTGGAGATCATGGCA 608 Query 23657 CATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAA 23716 || || || ||||||||||| || || |||||||| || || | | |||| ||| Sbjct 609 CAAGTCTTGAGGGTGTCGTAGATTCCTTCAATGCTGTCGTCCTTCATATCAACCAGGAAG 668 Query 23717 CACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTA 23776 || || |||| || || | || || |||| ||| || |||||| |||||| || Sbjct 669 CATGACGACAACTGAGCCTGCGGTGTGCCGGCGTTGAAAAGCGTCGGGGAGGCGTGTGTG 728 Query 23777 AAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGT 23836 ||| || | ||||| || ||||| || |||||| | ||||||| || || Sbjct 729 AAGAATTTGCTAGACATAAGGTTGTAGGTTTCGATGACTCGCTCAATGTTGTCACCCCAG 788 Query 23837 ATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGAC 23880 ||||| | || || ||||| ||||||| || || |||||||| Sbjct 789 ATACCTACAGCAACACGCATGATCATGTGCTGTGGCCTCTCGAC 832 >seq35528 Length=1726 Score = 140 bits (154), Expect = 3e-28 Identities = 305/455 (67%), Gaps = 4/455 (1%) Strand=Plus/Minus Query 57975 CTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTT 58034 || ||||| ||||| | |||||| ||||| ||||| || ||||| | || || Sbjct 929 CTGATCGCTTTCGCTGTCGTCGAGGGTATCTTCTTCAGCGGTGCTTTTGCCTCCATCTTC 870 Query 58035 TGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGC 58094 ||| | ||||| || ||||||||||| || ||||| || ||||||| | || ||||| Sbjct 869 TGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTGACTTTCTCCAACGAGCTCATCTCGCGT 810 Query 58095 GACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCG 58154 || |||||||| || || || ||||| || || ||| ||| | | | ||| | || Sbjct 809 GATGAGGGTCTACACACCGACTTTGCCTGTCTCCTGTTCTCGCTCCTGAACAACAGGCCC 750 Query 58155 ACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTC 58214 | ||| | ||| ||| | ||| || ||| ||| || | |||||| | Sbjct 749 AACAAGGAGGTTGTGAAGGAGATTGTTGTCGATGCTGTCAAGATTGAGCAAGAGTTTCTT 690 Query 58215 ACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATT 58274 || || || | || ||| | || || |||||| | ||||| |||||||| Sbjct 689 ACGGAGGCGTTGCCCTGCGCCCTCCTGGGCATGAACGCCAACCTGATGAAGCAGTACATT 630 Query 58275 GAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGA 58332 |||||||| || ||||||||| | ||| || || |||| ||| ||| | | Sbjct 629 GAGTTTGTCGCTGACAGACTTCTTGTCGCCCTGGGAAACGAGAAGGTC--TACCGTGCCA 572 Query 58333 AAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaa 58392 || || || ||||||||| | ||||| |||| |||||||| ||||| ||||| | Sbjct 571 CCAACCCATTCGATTTTATGGAGAACATCTCACTCGGCGGCAAGACCAACTTCTTCGAGA 512 Query 58393 aaaaaGTTAGCGAATATCAAAAATACGGCGTGATG 58427 || ||| |||| || |||||| ||| || ||| Sbjct 511 AACGCGTTGGCGAGTACCAAAAAGCCGGTGTCATG 477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445534105556880