Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001936935.1_202017-01-05] 41,689 sequences; 39,881,187 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq26053 154 2e-32 >seq26053 Length=873 Score = 154 bits (170), Expect = 2e-32 Identities = 408/622 (66%), Gaps = 16/622 (3%) Strand=Plus/Plus Query 66012 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 66071 ||||| || || | ||| |||||||| | ||| || |||| | || || || ||||| Sbjct 249 CCAGGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCCGTTTTTCTCAACGCGCTTCATG 308 Query 66072 AAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCT 66131 || |||||||| ||||||||||| | || | || | || | | ||||| ||||| Sbjct 309 AACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGGCACGAATCTCCTCCTTTCCG 368 Query 66132 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATG 66191 ||||| | || ||||||||| | | | ||| |||||||| || | ||| ||| Sbjct 369 TGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGCGTGCCACGGCTCAAGGTAGATG 428 Query 66192 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 66251 || | | || || || ||||| || ||||| || | ||| | ||| ||||| || | Sbjct 429 GCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCTGTGTTGTTGAAC 488 Query 66252 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 66311 || | || ||| |||| ||| || || || || || ||||| |||| ||||||| ||| Sbjct 489 ACACGCAGCATGGGAACAATGCCGTTCGAGGTGCCGTTGGTACCGGCGATATAGGAGCCA 548 Query 66312 CTTGCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 66369 | ||||| || | | ||| ||||| || || || ||||| || ||||| | | Sbjct 549 GTGGCACGGATGCGATGGACGTTG--AGACCGATACCGCCAGCCATCTTGGAGATCATGG 606 Query 66370 CGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAA 66429 | || || | || || ||||| || || || || || ||| |||| | || || | Sbjct 607 CACAAGTCTTGAGGGTGTCGTAGATTCCTTCAATGCTGTCGTCCTTCATATCAACCAGGA 666 Query 66430 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 66489 | || |||| || | || || || || || | || || || ||||| | Sbjct 667 AGCATGACGACAACTGAGCCTGCGGTGTGCCGGCGTTGAAAAGCGTCGGGGAGGCGTGTG 726 Query 66490 TAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT------ATCCC 66543 | || |||| ||| | || ||||| || || || || || || | ||| Sbjct 727 TGAAGAATTTGCTAGACATAAGGTTGTAGGTTTCGATGACTCGCTCAATGTTGTCACCCC 786 Query 66544 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 66603 | || ||||| || |||||||| | ||||||||| || || || || |||||| Sbjct 787 A------GATACCTACAGCAACACGCATGATCATGTGCTGTGGCCTCTCGACAATCTTGC 840 Query 66604 TGTTTATTTTCAACAAGTAGGA 66625 || | ||||| | ||| || Sbjct 841 CATTGAGCTTCAATAGGTAAGA 862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657829817926760