Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001936935.1_202017-01-05] 41,689 sequences; 39,881,187 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq26053 163 4e-35 seq35528 87.8 2e-12 >seq26053 Length=873 Score = 163 bits (180), Expect = 4e-35 Identities = 412/625 (66%), Gaps = 16/625 (3%) Strand=Plus/Plus Query 63020 AGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 63079 || ||||| || || | ||| |||||||| | ||| || |||| | || || || ||| Sbjct 246 AGGCCAGGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCCGTTTTTCTCAACGCGCTTC 305 Query 63080 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 63139 || || |||||||| ||||||||||| | || || || | || | | ||||| ||| Sbjct 306 ATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGGCACGAATCTCCTCCTTT 365 Query 63140 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63199 || ||||| | || ||||||||| | | | ||| | |||||||| || | ||| Sbjct 366 CCGTGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGCGTGCCACGGCTCAAGGTAG 425 Query 63200 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63259 ||||| | | || || || ||||| || ||||| || | ||| | ||| ||||| || Sbjct 426 ATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCTGTGTTGTTG 485 Query 63260 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTT 63319 | || | || ||| |||| ||| || || || || || ||||| || | ||||||| Sbjct 486 AACACACGCAGCATGGGAACAATGCCGTTCGAGGTGCCGTTGGTACCGGCGATATAGGAG 545 Query 63320 CCACTGGCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63377 ||| ||||||| || | | ||| ||||| || || || ||||| || ||||| | Sbjct 546 CCAGTGGCACGGATGCGATGGACGTTG--AGACCGATACCGCCAGCCATCTTGGAGATCA 603 Query 63378 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 63437 || || || | || || ||||| || || || || || ||| |||| | || | Sbjct 604 TGGCACAAGTCTTGAGGGTGTCGTAGATTCCTTCAATGCTGTCGTCCTTCATATCAACCA 663 Query 63438 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 63497 | || || |||| || | || || || || || | || || || |||| Sbjct 664 GGAAGCATGACGACAACTGAGCCTGCGGTGTGCCGGCGTTGAAAAGCGTCGGGGAGGCGT 723 Query 63498 GAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT------AT 63551 | || || |||| ||| | || ||||| || || || || || || | Sbjct 724 GTGTGAAGAATTTGCTAGACATAAGGTTGTAGGTTTCGATGACTCGCTCAATGTTGTCAC 783 Query 63552 CCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCT 63611 |||| || ||||| || |||||||| | ||||||||| || || || || |||| Sbjct 784 CCCA------GATACCTACAGCAACACGCATGATCATGTGCTGTGGCCTCTCGACAATCT 837 Query 63612 TGTTGTTTATTTTCAACAAGTAGGA 63636 || || | ||||| | ||| || Sbjct 838 TGCCATTGAGCTTCAATAGGTAAGA 862 >seq35528 Length=1726 Score = 87.8 bits (96), Expect = 2e-12 Identities = 172/254 (68%), Gaps = 3/254 (1%) Strand=Plus/Plus Query 32958 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATC 33017 || || |||||||| || || || || || ||||||||||| | ||||||| |||| Sbjct 1149 TCGGAGTGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGGGCCTCGGGAATC 1208 Query 33018 TGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33077 || ||||| | | ||||| || | | || || || || || || ||| || || Sbjct 1209 TGGACTTCGGCGCTGAATCGCTCAACGAGGTTCTCGTTGACGATGCCATCAGAAGCGGCG 1268 Query 33078 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAG---TTTATTCCAA 33134 || || || | | ||| || || || ||||| || ||| || || ||||| Sbjct 1269 AAGAATGCAAGGATGTGTGAGATGAAGTACTTTTCATCATCTGTGAGCTTGTTGTTCCAG 1328 Query 33135 TCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 33194 || | || ||| || || | ||| | ||||| | ||||| ||||| ||||| ||||| Sbjct 1329 TCGTGGAGATCCTTGGACAAATCAATCTCTTCGGCCGTCCAGAATGAGGCCTCGGCCTTC 1388 Query 33195 TTATACATATTCCA 33208 || ||||| | ||| Sbjct 1389 TTGTACATCTGCCA 1402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633301806444400