Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001936935.1_202017-01-05] 41,689 sequences; 39,881,187 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq29624 118 9e-22 seq41284 87.8 2e-12 >seq29624 Length=1096 Score = 118 bits (130), Expect = 9e-22 Identities = 157/216 (73%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| | ||||| ||| |||||||| ||||||| || || || Sbjct 131 ATGCAAATCTTCGTCAAGACGCTTACCGGCAAAACCATCACACTCGAAGTTGAATCTTCA 190 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| ||||| |||| || |||| | ||| ||||| || || || || ||||| Sbjct 191 GACACAATCGACAACGTCA---AATCAAAGATTCAA-GACAAGGAGGGTATCCCGCCTGA 246 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 |||||| || | || ||||| ||||| || | || |||| || || || ||||| Sbjct 247 CCAACAACGCTTGATCTTTGCGGGCAAGCAGCTGGAGGATGGACGAACCCTGTCTGATTA 306 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||||||| || || || || || || | ||||| Sbjct 307 CAATATTCAGAAGGAGTCGACTCTGCACCTTGTGCT 342 >seq41284 Length=4352 Score = 87.8 bits (96), Expect = 2e-12 Identities = 129/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 || || |||||| |||| || || ||||||| | || || ||||| || ||||| ||| Sbjct 3973 TTCGTGAAGACTCTGACTGGCAAGACCATCACCTTGGAGGTCGAGTCCTCGGACACGATC 4032 Query 25068 GAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGAT 25126 || ||||| | || | ||| ||||| || || ||||| |||||||||||||| | Sbjct 4033 GACAATGTGAAGTCCAAGATTCAG-GACAAGGAGGGAATTCCCCCTGACCAACAGCGTCT 4091 Query 25127 TATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAA 25186 ||| ||||| ||||| || | || || | || ||| | ||| ||||| || || || Sbjct 4092 TATCTTTGCTGGCAAGCAGCTGGAGGACGGCCGTACTCTCTCCGACTACAACATCCAGAA 4151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433107832678535