Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001936935.1_202017-01-05] 41,689 sequences; 39,881,187 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq41475 260 2e-64 seq41585 122 1e-22 >seq41475 Length=5023 Score = 260 bits (288), Expect = 2e-64 Identities = 434/626 (69%), Gaps = 6/626 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||||||||| || || || ||||| | ||||| || |||||||| Sbjct 1856 TCAAAGTCCTCACCACCCAAGTGGGTGTCACCAGCGGTGGACTTGACCTCGAAGATACCC 1915 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | | | ||| ||||| || ||||||||||| || || ||||| || ||| Sbjct 1916 TCCTCAATGGTAAGGAGCGACACATCGAAAGTACCACCACCAAGATCGAAAATAAGCACG 1975 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || || | || ||||| || |||||||| ||||| || || || || || || Sbjct 1976 TTGCGCTCACCCTCGACCTTCTTGTCAAGACCGTAGGCGATGGCGGCGGCAGTAGGCTCG 2035 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || ||||| || |||||| |||||||| | ||||| || || || || || Sbjct 2036 TTGATGATACGGAGGACGTTCAGACCAGCAATGAGACCGGCATCCTTGGTAGCCTGACGC 2095 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 ||||| ||||| |||||||| ||||| || ||||| |||| |||| | ||| || Sbjct 2096 TGCGAGTCGTTGAAGTAGGCGGGGACGGTGACGACAGCGTTGTTGACGGTGCCACCAAGG 2155 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || || || || | || ||| ||||| | ||||| ||||| ||||| |||| | Sbjct 2156 TAAGACTCAGCAGTCTCACGCATCTTGGTCAAGACCATGGATGAGATCTCCTCAGGAGTG 2215 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876 ||||| || | || || || || || || ||||| | || || ||| | | Sbjct 2216 AACTGCTTTGACTCTCCCTTGAACTCGACCTCAATGACAGGCTT---GCCAGACCTCTCG 2272 Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936 | ||||| | | | | ||||| ||| | ||||||| ||| || ||||| | Sbjct 2273 ACGACCTTGAAGGGGAAGTGCTTCATGTCGGCCTGGACCTCAGCGTCGGAGAACTTGCGA 2332 Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 || || | | ||| || || || || ||||| | ||||||||| || |||||||| Sbjct 2333 CCAATCAACCTCTTCGCGTCGAAGACGGTGTTGTGGGGGTTCATAGCGACCTGGTTCTTG 2392 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 ||||| || || || ||||| || || ||||| ||||| ||| | || ||||| ||| Sbjct 2393 GCCGCATCTCCAATCAGACGCTCGGTA---TCCGTGAACGCCACGAAGGACGGGGTTGTT 2449 Query 8057 CGATTCCCTTGGTCGTTCGCAATAAT 8082 || || || ||||| || || ||||| Sbjct 2450 CGGTTACCCTGGTCATTGGCGATAAT 2475 >seq41585 Length=5734 Score = 122 bits (134), Expect = 1e-22 Identities = 324/492 (66%), Gaps = 6/492 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||| | ||| || || || ||||| || ||| || || | ||| Sbjct 1059 TCGAAATCCTCACCACCAAGGTGGGTGTCACCGGCGGTGGCCAGGACCTCGAAAACACCG 1000 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || || | | ||||| || || || |||||||||||||| | | || | Sbjct 999 TTGTCGATCGAAAGGAGGGAAACGTCGAAGGTGCCACCACCCAGGTCGTACACGATGATC 940 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 | | || ||| | | |||| || || |||||||| | ||| || ||||| || || Sbjct 939 TGGTTCTCCTCGCC---GGTCTTGTCCAGGCCGTACGCCAAAGCGGCAGCCGTGGGCTCG 883 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 |||| |||||||||| ||| || || |||||| | || || || ||||| || | Sbjct 882 TTAACAATACGAAGAACGTTGAGACCGGCAATAACACCGGCGTCCTTTGTCGCCTGCCTC 823 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || ||||| ||||| || || || || ||||| |||| || || ||||| || | Sbjct 822 TGGTTGTCGTTGAAGTACGCGGGAACGGTGACGACGGCGTGGGTAACCTTCTTGCCCAAG 763 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || | || || | || ||||| ||| | | ||| | || | ||| || | | Sbjct 762 TAGGCCTCGGCAACCTCCTTCATCTTGCCCAAGATCATGGCCGAGACCTCCTCGGGGGTG 703 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876 ||||| || || ||||| || | ||| || || | ||| || ||| | | | Sbjct 702 AACTGCTTGGTCTCACCCTTGACATCGACCGAAACAACGGGCTT-TCCTC--CCTTGTTC 646 Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936 | |||||| || | | | || ||||| | ||||| | | ||||| |||||| | Sbjct 645 ACAACCTTGTAGGGGAAGTGCTTGATATCTTGCTGGACATCCTTGTCCGTAAACTTGCGA 586 Query 7937 CCGATAAGACGC 7948 |||||||||||| Sbjct 585 CCGATAAGACGC 574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634801824358760