Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001936935.1_202017-01-05] 41,689 sequences; 39,881,187 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq32698 118 1e-21 seq35528 104 3e-17 seq41104 87.8 2e-12 >seq32698 Length=1358 Score = 118 bits (130), Expect = 1e-21 Identities = 430/667 (64%), Gaps = 12/667 (2%) Strand=Plus/Minus Query 112704 ATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGAT 112763 || |||||||| || || ||||| ||||| || || || ||||||||| | Sbjct 1087 ATCTTTGAGACCATCTACCACGCTGCTCTGACTGCCTCTTGCAAGCTGGCAGAGGAGCAG 1028 Query 112764 GGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATG 112823 |||||||| || | ||||| ||||| | |||||| || | || || | ||| ||| Sbjct 1027 GGTCCATACTCGACATACGAGGGATCTCCTGTTTCACAGGGCATTCTCCAGTATGACATG 968 Query 112824 TGGGAAGGTGAGACCAAGCTTCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAG 112883 ||| | | || || | || ||||||||||||||||||| ||||||| | Sbjct 967 TGGAACGTCAAGCCCTCAGACCTCTGGGACTGGGACGCTCTCAAGGCCAACATCAAGCAA 908 Query 112884 AAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATC 112943 | ||| | || ||||| | | | || || ||||| ||||| ||| | |||||| Sbjct 907 CATGGTGTCCGCAACAGCTTGCTCGTTGCCCCCATGCCTACAGCTAGCACGTCGCAAATC 848 Query 112944 TTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTC 113003 | || || || || |||||||| ||||| || | ||||| || | | | || Sbjct 847 CTTGGCAACAACGAGTGCTTTGAGCCCTATACTTCCAACATTTACCAACGCCGTGTGCTT 788 Query 113004 GCGGGAGAGTTTGTGATTGTCAA---CAAGCATCTCGTGGATGACCTCAAAGAGATTGGT 113060 || || ||||| | | ||||| | | ||| |||| || ||| ||||| Sbjct 787 GCCGGCGAGTTCCAGGTAGTCAACCCCTGGTTGCTCAAGGAT---CTGGTCGAGCTTGGT 731 Query 113061 CTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATT 113120 || ||||| | || |||||| | | || | | ||| || ||||| || || ||| Sbjct 730 CTGTGGTCAGACGACATGAAGAACCGTATCATCGCCGAGGGAGGCTCCATCCAGAACATT 671 Query 113121 GTGGATATTCCAGATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAG 113180 | || || || || | |||||| | ||| || |||||||| ||| | | | Sbjct 670 GCCAGCATCCCTGAGGATACCAAGAAGCTCTACAAGACTGTTTGGGAGATCTCG-CAACG 612 Query 113181 GA-TGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATG 113237 | ||| || | |||||||| || |||||| ||||||||| | |||| ||| | Sbjct 611 TACCGTCGTTCAGATGGCCGCTGACCGTGGTGCCTTCATTGACC--AGTCCCAGTCGCTC 554 Query 113238 AATCTATTCATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGG 113297 || | |||| || || ||| |||| || | || ||||| | | | ||| Sbjct 553 AACATCCACATGCGCGACCCGACCATGGGCAAGATCACCTCGATGCATTTCACCGGCTGG 494 Query 113298 AAGAAGGGTCTCAAAACGGGGATGTATTACCTCCGATCTAAGGCAAAGGCGCGCCCAATT 113357 ||| |||||||| || || ||||| ||||| || | ||||| || | || ||| Sbjct 493 AAGCTTGGTCTCAAGACCGGTATGTACTACCTGCGGACGCAGGCAGCCGCCCAGCCGATT 434 Query 113358 CAGTTCA 113364 ||||||| Sbjct 433 CAGTTCA 427 >seq35528 Length=1726 Score = 104 bits (114), Expect = 3e-17 Identities = 161/226 (71%), Gaps = 8/226 (4%) Strand=Plus/Minus Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGTC 102166 ||| || || || | ||||| || || |||||| ||| |||| | || | ||||| Sbjct 1005 AGTCCCCTGCATCCGCAAGAAGGCCGACTGGGCTCTGAGGTGGATCACCGACAAGAAGTC 946 Query 102167 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGT-GTTGAGGGTATCTTCTTCTCTG 102225 ||||||| ||| || |||| || || ||| || ||||||||||||||| | Sbjct 945 AA---CCTTTGCCACGCGCCTGATCGCTTTCGC-TGTCGTCGAGGGTATCTTCTTCAGCG 890 Query 102226 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 102285 || | || | | || | |||||||||||||| || || ||||| ||||| |||| Sbjct 889 GTGCTTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTGACTTTCT 830 Query 102286 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 |||||||||| ||||| ||||| ||||| || ||| || ||||| Sbjct 829 CCAACGAGCTCATCTCGCGTGATGAGGGTCTACACACCGACTTTGC 784 >seq41104 Length=3987 Score = 87.8 bits (96), Expect = 2e-12 Identities = 269/411 (65%), Gaps = 9/411 (2%) Strand=Plus/Plus Query 15975 AAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 16034 ||||| |||||||| ||||||| |||||| | || || || || || || || | | Sbjct 188 AAACCGTCCATCTCGGTCAAAATCTGGTTCAGTGTGGCCTCGCGCTCGTCGTT-GCCGCC 246 Query 16035 ATACCAC-CAGCACTG---CGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGAT 16090 | | | | || | | || ||| || | ||||| || || || ||||||| ||| Sbjct 247 AAAGCGCGCACCCGAGTCACGGGCCTTGCCGATAGCATCGATTTCGTCGATGAAGATGAT 306 Query 16091 GCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACC 16150 ||| || | || ||| || | | || || || || ||||| || || ||||| Sbjct 307 GCAAGGAGCGTGTTTGCGCGCCTCCTTGAACAGGTCTCGCACACGAGACGCACCGACACC 366 Query 16151 AACAAACATCTCCACAAAGTTTG--CGGCGGAACATTGGATGAAGGGGACATTAGATTCA 16208 |||||||| || || || | || | | || | || |||||| || || ||| Sbjct 367 GACAAACATTTCGACGAACTCTGAACCACTGACGCT--GAAGAAGGGCACGCCCGACTCA 424 Query 16209 CCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCA 16268 || || | || ||| | ||| ||||||||||| ||||| ||| | || | |||| Sbjct 425 CCGGCCGTAGCCTTGGCCAAAAGCGTCTTACCCGTTCCTGGAGGACCGGACAGAATGGCA 484 Query 16269 CCTCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACA 16328 || ||||||||||||||||| | || | | |||| ||| ||| || || |||| Sbjct 485 CCACGTGGAATCTTGGCGCCCAACCGAACGAACTTCTCCGGTGTCTTCAGGAAGCTCACA 544 Query 16329 ATCTCTTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATCGGTAAAC 16379 | || | | |||| ||||| ||||| || | || |||| |||| Sbjct 545 AATTCGACAATTTCAAGCTTGGCCTCGTCAGCACCGGCTACGTCGGCAAAC 595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620418923376080