Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001936935.1_202017-01-05] 41,689 sequences; 39,881,187 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq16763 116 3e-21 seq41097 82.4 6e-11 >seq16763 Length=509 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||||||| || |||||||| ||||| || ||||| || || || | ||| |||| || Sbjct 343 ACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAAAGGGTCCGACCGTCCTCA 284 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| || || || || || || ||||| |||| |||| ||||||||||| Sbjct 283 AGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGG 224 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| |||||| | | | || || | ||| ||||||| |||||||| || Sbjct 223 ATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTCGACCTCCAAGGTAATCGTCTTG 164 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || | ||||| || ||||||||||| Sbjct 163 CCAGTGAGGGTTTTGACGAAAATCTGCAT 135 Score = 89.7 bits (98), Expect = 4e-13 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 48620 CTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAAT 48679 |||||| || || || |||||||||||||| |||| |||| |||||||| || || Sbjct 509 CTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGAATACCCTCCTTATCTTGGAT 450 Query 48680 CTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCC 48739 ||| ||| ||| | | | ||||| | ||| ||||||| ||| || || || || Sbjct 449 CTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACCTCCAACGTGATGGTCTTGCC 390 Query 48740 CGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||||||| || || || |||||||| Sbjct 389 CGTCAAAGTCTTGACGAAGATCTGCAT 363 >seq41097 Length=3974 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| ||| | || || |||||||| || || || ||||| || || || | | Sbjct 361 AGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTCCTG 302 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | |||||| |||||||| |||| ||||| || |||| ||| | |||||| Sbjct 301 CCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCCTCC 242 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | | || || ||||||||| | || Sbjct 241 TTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTG 182 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || ||||| | || || || || |||||||| Sbjct 181 ATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380744051438547