Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001936935.1_202017-01-05] 41,689 sequences; 39,881,187 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq26053 277 2e-69 seq32698 104 3e-17 seq35528 87.8 2e-12 seq34257 86.0 7e-12 >seq26053 Length=873 Score = 277 bits (306), Expect = 2e-69 Identities = 530/774 (68%), Gaps = 18/774 (2%) Strand=Plus/Minus Query 53174 GAGACGCCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACG 53233 |||| ||| ||| | | ||||||| || || | |||||| |||||| || | Sbjct 829 GAGAGGCCACAGCACATGATCATGCGTGTTGCTGTAGGTATCTGGGGTGACAACATTGAG 770 Query 53234 CGTGTCCGTGAGACGTACGACTTAATG---AGCCAAAAGTACTTTACGCACGCCACGCCA 53290 || ||| || || ||| || | ||| ||| || | ||| || |||||| | || Sbjct 769 CGAGTCATCGAAACCTACAACCTTATGTCTAGCAAA---TTCTTCACACACGCCTCCCCG 713 Query 53291 ACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATG 53350 || || |||||||| || || || ||||| ||||| ||||||||||| | ||| Sbjct 712 ACGCTTTTCAACGCCGGCACACCGCAGGCTCAGTTGTCGTCATGCTTCCTGGTTGATATG 653 Query 53351 AAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAG 53410 ||||| ||| || || || |||||||| || |||||| |||||| ||||||||| Sbjct 652 AAGGACGACAGCATTGAAGGAATCTACGACACCCTCAAGACTTGTGCCATGATCTCCAAG 593 Query 53411 TGGTCGGGTGGTATCGGTATCCACTGC--TCGAACGTCCGTGCGAACGGCACACCAATCA 53468 | | || ||||||||| || || | ||| | ||||||| | ||| | ||| Sbjct 592 ATGGCTGGCGGTATCGGTCTCAACGTCCATCGCA--TCCGTGCCACTGGCTCCTATATCG 535 Query 53469 AGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGG 53528 || || |||||| | | | || || || || ||||| || || ||||||||||| | Sbjct 534 CCGGTACCAACGGCACCTCGAACGGCATTGTTCCCATGCTGCGTGTGTTCAACAACACAG 475 Query 53529 CCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGC 53588 | || |||||| |||||||||| |||||| || | || ||||||||||| |||| Sbjct 474 CTCGCTACGTCGACCAGGGTGGCAACAAGCGCCCCGGTGCCTTTGCCATCTACCTTGAGC 415 Query 53589 CGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGA 53648 |||||||||| || | | ||||| ||||| || | ||| || || | || |||| Sbjct 414 CGTGGCACGCAGATGTCTTCGAGTTCCTCGACCTAAGGAAGAACCACGGAAAGGAGGAGA 355 Query 53649 TGCGCTGCCGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGG 53708 | || |||||||||||| ||||| ||||| || || || |||||| | || | Sbjct 354 TTCGTGCCCGTGACCTGTTCCTCGCTCTTTGGATCCCTGATCTGTTCATGAAGCGCGTTG 295 Query 53709 AGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCT 53768 |||| ||| || ||| | |||||||||||||||||||||| |||||| || || Sbjct 294 AGAAAAACGGCGACTGGACCTTGATGTGCCCGAACGAGTGCCCTGGCCTCGCGGACTGCT 235 Query 53769 ACGGTGAGGAGTTTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAG---- 53824 ||||||| ||||| | | ||||| || ||| | || || ||||| || | Sbjct 234 ACGGTGAAGAGTTCGAGGCTCTGTATGAGAAGTATG-AG--CA-GGCCGGTAAGGGTCGC 179 Query 53825 AAGAAGGTCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGA 53884 |||| | ||||||| | | | ||| | | ||||| || ||| ||||| || Sbjct 178 AAGACGATCAAGGCCCAGAAACTTTGGTACTCCATCCTGGAGGCTCAGACTGAGACTGGT 119 Query 53885 ACGCCGTACATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938 | |||| |||| ||||||||| |||| |||||||||||||||||| Sbjct 118 AACCCGTTCATGCTGTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAAC 65 >seq32698 Length=1358 Score = 104 bits (114), Expect = 3e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 55787 GCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCT 55846 ||||| |||||||| | ||| |||||||||||||| || |||||| |||| | || Sbjct 592 GCTGACCGTGGTGCCTTCATTGACCAGTCCCAGTCGCTCAACATCCACATGCGCGACCCG 533 Query 55847 TCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGT 55906 | ||| |||| | | ||||||||| || ||| |||||| || |||||||| ||| Sbjct 532 ACCATGGGCAAGATCACCTCGATGCATTTCACCGGCTGGAAGCTTGGTCTCAAGACCGGT 473 Query 55907 ATGTACTATCTGCGGAC 55923 |||||||| |||||||| Sbjct 472 ATGTACTACCTGCGGAC 456 >seq35528 Length=1726 Score = 87.8 bits (96), Expect = 2e-12 Identities = 178/262 (68%), Gaps = 7/262 (3%) Strand=Plus/Plus Query 75009 TCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAAC 75068 ||||||| | | |||| |||| || ||||| ||||| || ||||| ||| | | Sbjct 1113 TCCTTGATGTACGTGTCGATCAGGAGCGAGTAAGTCTCGGAGTGAATGTTCTCCATCATG 1172 Query 75069 GACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATC--CTTTGAAAAATTCA 75126 |||| | ||||||| | || ||||| | |||||| || || | |||| ||| Sbjct 1173 ATCTGGAAGCCGTAGAAGCAACGGGCCTCGGGAATCTGGACTTCGGCGCTGAATCGCTCA 1232 Query 75127 TGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGA 75186 ||| ||||| |||||||||| || || |||||||| || || || | | || Sbjct 1233 A--CGAGGTTCTCGTTGACGATGCCATCAGAAGCGGCGAAGAATGCAAGGATGTGTGAGA 1290 Query 75187 TAAAGTGGCGCTCATCGTCAGTGAGTTTGTC---CCAATCCTTCAGGTCCCCCGCCAAAT 75243 | |||| ||||| || ||||| |||| ||| || | || ||| | ||||| Sbjct 1291 TGAAGTACTTTTCATCATCTGTGAGCTTGTTGTTCCAGTCGTGGAGATCCTTGGACAAAT 1350 Query 75244 CAATCTCCTCGACCGTCCAGAA 75265 ||||||| ||| |||||||||| Sbjct 1351 CAATCTCTTCGGCCGTCCAGAA 1372 >seq34257 Length=1549 Score = 86.0 bits (94), Expect = 7e-12 Identities = 90/117 (77%), Gaps = 6/117 (5%) Strand=Plus/Minus Query 119074 ACTGAACACGTTGGCTAGCTTGGCACCGTATCCGTTCCGACCACCGGTCACGCGCT---G 119130 |||||| | ||||| ||||| || || |||||||| ||||| || |||| || | Sbjct 837 ACTGAAAATGTTGGTGAGCTTTGCGCCATATCCGTTACGACCTCC---CACGGTCTTGAG 781 Query 119131 CTCCTCGTCGTTGTAGTTGGAGCTGGTCAAAAGGTGCCCAAAGATGAGCTCGGGGAT 119187 ||||| ||||| ||||||||| | |||| ||||| || ||||||||||| ||||| Sbjct 780 CTCCTTGTCGTCGTAGTTGGAACCCGTCAGGAGGTGACCGAAGATGAGCTCCGGGAT 724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546930838902200