Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001936935.1_202017-01-05] 41,689 sequences; 39,881,187 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq41097 105 6e-18 >seq41097 Length=3974 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || |||||||| || || || || || |||| || || | |||| |||||||| Sbjct 346 TGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTCCTGCCGTCCTCAAGCTGC 287 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| ||||| || | ||||||||||| | ||| | | ||| |||||| ||| || Sbjct 286 TTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTG 227 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 |||| | | | || |||||||||||||| || | |||||| | || ||||| Sbjct 226 GACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCCGTG 167 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || ||||| ||||| Sbjct 166 AGGGTCTTGACGAAGATCTGCAT 144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429327354458057