Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001936935.1_202017-01-05] 41,689 sequences; 39,881,187 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq26053 150 2e-31 seq35528 87.8 2e-12 >seq26053 Length=873 Score = 150 bits (166), Expect = 2e-31 Identities = 405/620 (65%), Gaps = 12/620 (2%) Strand=Plus/Plus Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATA 78014 |||||||| || || ||||||||||| | |||||| || | || || ||| || ||||| Sbjct 249 CCAGGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCCGTTTTTCTCAACGCGCTTCATG 308 Query 78015 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCT 78074 || |||||||| ||||| ||||| | || || || |||| | | || || ||||| Sbjct 309 AACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGGCACGAATCTCCTCCTTTCCG 368 Query 78075 GTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATT 78134 ||||| | || ||||| ||||| | | ||| | ||||| || || || || || Sbjct 369 TGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGCGTGCCACGGCTCAAGGTAGATG 428 Query 78135 GCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAA 78194 || | | || || || || || || ||||| || | || | || ||||| || | Sbjct 429 GCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCTGTGTTGTTGAAC 488 Query 78195 ACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCA 78254 || | || ||| |||| ||| ||||| || || || || || || | ||||| ||| Sbjct 489 ACACGCAGCATGGGAACAATGCCGTTCGAGGTGCCGTTGGTACCGGCGATATAGGAGCCA 548 Query 78255 CTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCG 78314 | || || || | | | | || || || || |||||||| || || | || Sbjct 549 GTGGCACGGATGCGATGGACGTTGAGACCGATACCGCCAGCCATCTTGGAGATCATGGCA 608 Query 78315 CAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAA 78374 ||| || | || |||||||| || || || ||||| ||| |||| | || || || Sbjct 609 CAAGTCTTGAGGGTGTCGTAGATTCCTTCAATGCTGTCGTCCTTCATATCAACCAGGAAG 668 Query 78375 CAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTA 78434 || |||| ||| || || || || || || | ||||| || || || || Sbjct 669 CATGACGACAACTGAGCCTGCGGTGTGCCGGCGTTGAAAAGCGTCGGGGAGGCGTGTGTG 728 Query 78435 AACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGT------CCCAT 78488 || |||| ||| | || ||||| ||||| || || || |||| |||| Sbjct 729 AAGAATTTGCTAGACATAAGGTTGTAGGTTTCGATGACTCGCTCAATGTTGTCACCCCA- 787 Query 78489 TGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTA 78548 || ||||| || |||||||| | ||| ||||| || || || || |||| | Sbjct 788 -----GATACCTACAGCAACACGCATGATCATGTGCTGTGGCCTCTCGACAATCTTGCCA 842 Query 78549 TTTATTTTCAACAAGTATGA 78568 || | ||||| | ||| || Sbjct 843 TTGAGCTTCAATAGGTAAGA 862 >seq35528 Length=1726 Score = 87.8 bits (96), Expect = 2e-12 Identities = 172/254 (68%), Gaps = 3/254 (1%) Strand=Plus/Plus Query 48438 TCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATC 48497 ||||||||||| || || || ||||| || ||||| || || | || || | ||| Sbjct 1149 TCGGAGTGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGGGCCTCGGGAATC 1208 Query 48498 TGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCA 48557 || || || | | ||||| ||| | | ||||| || || || |||||| ||| || Sbjct 1209 TGGACTTCGGCGCTGAATCGCTCAACGAGGTTCTCGTTGACGATGCCATCAGAAGCGGCG 1268 Query 48558 AAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAG---TTTATTCCAG 48614 || ||||| | | ||| || || || ||||| | || || || |||||| Sbjct 1269 AAGAATGCAAGGATGTGTGAGATGAAGTACTTTTCATCATCTGTGAGCTTGTTGTTCCAG 1328 Query 48615 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTT 48674 || | || ||| || || | ||| | ||||| || ||||| ||||| ||||| || || Sbjct 1329 TCGTGGAGATCCTTGGACAAATCAATCTCTTCGGCCGTCCAGAATGAGGCCTCGGCCTTC 1388 Query 48675 TTATACATATTCCA 48688 || ||||| | ||| Sbjct 1389 TTGTACATCTGCCA 1402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694306799404960