Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F002105295.1_202017-04-21] 1,924 sequences; 38,934,700 total letters Query= NC_015254.1 Length=41518 Score E Sequences producing significant alignments: (Bits) Value seq309 86.0 2e-12 >seq309 Length=96301 Score = 86.0 bits (94), Expect = 2e-12 Identities = 164/242 (68%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 23956 TTAATTAAAACAGCTATAATGCATGCCCAGTTTGAATCTATTCATCCTTTTTTAGATGGA 24015 ||||| ||| ||||| | ||||| || |||||||| |||||||| |||||||||||| Sbjct 15787 TTAATAAAAGTTGCTATCCTTCATGCACAATTTGAATCAATTCATCCGTTTTTAGATGGA 15846 Query 24016 AATGGTAGAATGGGAAGGATTTTAATTGTACTAAATACGATGCAAGATAAACTGATTGAT 24075 ||||| | | || || ||| | || | ||| | | |||||| | ||| || Sbjct 15847 AATGGACGCTTAGGCAGAATTATCATAGCCCTATACATGATGCAGTCTGAACAAATATCC 15906 Query 24076 AAGCCTGTCTTTTTTGTTAGTGAAGAACTTGAAAAAGAACGTTTACGTTATTATAATTTA 24135 | ||| | || ||||||||||| ||| | || || | || | ||||| | ||| Sbjct 15907 AGTCCTATATTCTTTGTTAGTGAGGAATTAGAGAAGCAGCGAGCAAAGTATTACCACTTA 15966 Query 24136 TTAAACGGAACACGAGGAGAAAGTCCAGAATGGTTTGCTTGGATTGATTTTTTCTTAGAT 24195 |||| | ||| || || | | || |||||| | ||| | | |||||||| ||| Sbjct 15967 CTAAATGAAACGCGTGGTAATAACCCTAAATGGTATAACTGGCTGAACTTTTTCTTGGAT 16026 Query 24196 GC 24197 || Sbjct 16027 GC 16028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132732967314240