Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F002105295.1_202017-04-21] 1,924 sequences; 38,934,700 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1312 118 3e-21 >seq1312 Length=186730 Score = 118 bits (130), Expect = 3e-21 Identities = 143/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| ||||| || || ||||| ||||| | ||||| ||| ||| |||||| |||| Sbjct 19949 CAAGACGCTTACCGGCAAAACCATCACACTCGAAGTTGAATCTTCAGACACAATCGACAA 20008 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || || |||||||||||| || || || || ||| ||| ||| | | ||||| Sbjct 20009 CGTCAAATCAAAGATTCAAGACAAGGAGGGTATCCCGCCTGACCAACAACGTTTGATCTT 20068 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || |||||| |||| |||||||| || || | |||||||| | ||||| ||||| Sbjct 20069 TGCGGGCAAGCAGCTGGAGGATGGAAGAACCCTGTCTGATTACAATATTCAGAAGGAGTC 20128 Query 206364 TACTCTTCACCTTGT 206378 ||||| |||||||| Sbjct 20129 GACTCTGCACCTTGT 20143 Score = 102 bits (112), Expect = 2e-16 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || || || || ||||| ||||| || || ||| ||| Sbjct 19710 CAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACGTTGGAGGTCGAGTCTTCAGAC 19769 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || || ||||| ||||| || || || ||| |||||| || Sbjct 19770 ACGATTGACAATGTTAAATCCAAGATCCAAGACAAGGAGGGTATTCCTCCGGACCAACAG 19829 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 |||| |||||||| |||||||||||||| |||||| | || || |||| |||||| || Sbjct 19830 CGACTGATCTTCGCTGGAAAGCAGTTGGAGGATGGACGCACGCTGTCCGACTACAACATC 19889 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 || || || |||||||| ||| Sbjct 19890 CAAAAGGAATCTACTCTGCAC 19910 Score = 86.0 bits (94), Expect = 1e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 |||||||| ||||| ||||| ||||| | ||| || |||| || || |||||||| ||| Sbjct 20143 ACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGACAGGGTTCTTCCATCCTCC 20084 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 |||||||| || || ||||| | |||||||| Sbjct 20083 AGCTGCTTGCCCGCAAAGATCAAACGTTGTTG 20052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181791666640004