Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F002105295.1_202017-04-21] 1,924 sequences; 38,934,700 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq1496 354 9e-93 seq1312 158 1e-33 seq1903 154 2e-32 seq1441 125 8e-24 seq1567 82.4 9e-11 >seq1496 Length=157505 Score = 354 bits (392), Expect = 9e-93 Identities = 1159/1783 (65%), Gaps = 47/1783 (3%) Strand=Plus/Minus Query 80005 ACCGTCACCTGAATTGGCTTGGCCTTTGCCCGCGTCCGCAGATAGTACATGCCCGTCTTG 80064 || || | |||||| |||| ||| |||| |||||||||| ||||||||||| |||||| Sbjct 102845 ACAGTGAACTGAATCGGCTGGGCGGCTGCCTGCGTCCGCAGGTAGTACATGCCGGTCTTG 102786 Query 80065 AGGCCCTTCTTCCAGCCGTACAGGTGCATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCC 80124 || || |||||||||| | ||||| || ||| ||| | | || |||| | Sbjct 102785 AGACCAAGCTTCCAGCCGGTGAAATGCATCGAGGTGATCTTGCCCATGGTCGGGTCGCGC 102726 Query 80125 ATGAAGATGTTCAGAGACTGAGACTGACAGATGAAAGCCCCACGATCTGCCGCCATTTCA 80184 ||| |||||| || ||||| ||||| ||||| || ||||| || || ||||| | | Sbjct 102725 ATGTGGATGTTGAGCGACTGGGACTGGTCAATGAAGGCACCACGGTCAGCGGCCATCTGA 102666 Query 80185 ATAATTGACTTTTGTGGAATTTCCCATACTGTACGATACACCTTACGAAGCTCCTCTGGA 80244 | | | ||| | || ||||| || || || | ||| ||||| || Sbjct 102665 ACGACGGTACGTTGCGAGATCTCCCAAACAGTCTTGTAGAGCTTCTTGGTATCCTCAGGG 102606 Query 80245 ATGT---CCAGATTTTGCACACTGCCACCGTCCTTTACAATTTGATTTTTCAATTCAGAC 80301 ||| | | || || | ||| || || | || | || |||| || Sbjct 102605 ATGCTGGCAATGTTCTGGATGGAGCCTCCCTCGGCGATGATACGGTTCTTCATGTCGTCT 102546 Query 80302 GTCCAGACACCAAGCTTGTGCAGATCTTTCA-CAAG--GTGCTTGTTAATCATGACAAAC 80358 | ||| | |||||||| | |||||| || | ||| | | ||| | | || || Sbjct 102545 GACCACAGACCAAGCTCGACCAGATCCTTGAGCAACCAGGGGTTGACTACCTGGA---AC 102489 Query 80359 TCTCCCGCGAGGGTGCGACGCAGATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCGTTG 80418 || || || || || || | || | ||| | ||| || |||||||| ||||||| Sbjct 102488 TCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGCTCAAAGCACTCGTTG 102429 Query 80419 TTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATCGGGCCGACCAACAGTGAATTCCGC 80478 || || ||||| || | |||||| || || ||||| ||| | || | || || || Sbjct 102428 TTGCCAAGGATTTGTGACGTGCTAGCTGTAGGCATGGGGGCAACGAGCAAGCTGTTGCGG 102369 Query 80479 AGGCCGTGCTTCTTGATAT---CCTCGCGCAAATCTGA---CCAAAAATCAACCCCAACG 80532 | || || | |||||| | ||| | | || | ||| | || || | Sbjct 102368 ACACCATGTTGCTTGATGTTGGCCTTGAGAGCGTCCCAGTCCCAGAGGTCTG----AAGG 102313 Query 80533 CTGTGACC--CCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACG 80590 || |||| ||||||||||| ||| | || |||| || | ||||| ||| || | | Sbjct 102312 CT-TGACGTTCCACATGTCGTACTGGAGAATTCCCTGTGAAACAGGAGATCCCTCGTATG 102254 Query 80591 TCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAA 80650 || ||| || |||| | || || |||| || || | | || || ||||| || | Sbjct 102253 TCGAGTATGGACCCTGCTCCTCTGCAAGCTTGCAAGAGGCAGTCAGAGCAGCGTGGTAGA 102194 Query 80651 TGCACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCA 80710 || |||||||| |||||| | | | || |||| || ||||| | || | | Sbjct 102193 TGGTCTCAAAGATCTTCTTGTTGAGATCACGAGCCTCAGGAGACTCGAAAGGCAGACGGA 102134 Query 80711 TCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGT 80770 | ||| |||||||||| || || ||||| | |||| || | ||||||| ||| Sbjct 102133 GTGCAAGGAAAGCGTCAGCCAGACCTTGGACGCCCAGACCGATAGGCCTGTGGCGCATGT 102074 Query 80771 TCGATCGCTCG-GCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTG 80829 | | | || |||||| | | ||||| |||| ||||||| ||| |||||| Sbjct 102073 T-GCTGTTGCGTGCCTCCTGGACGGGGTAGTAGTTGACTTCGATGATCTTGTTGAGGTTG 102015 Query 80830 CGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCCT----- 80884 || ||| || | || || ||||| ||||||| ||||||| ||| ||| | Sbjct 102014 CGAACAACGACTTGAGTGACCTCATGGAGTTTCTCAAAGTCGTATTCA--CCCTTGTGGT 101957 Query 80885 --TC-ACAAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCAT 80941 || || || || || |||||| || || ||||| || || ||||| |||| Sbjct 101956 AGTCGACGAACTGGGGCAGAGCCAGGGAAGCAAGGTTGCATACAGCAACCTCGTCAGGGG 101897 Query 80942 CTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCT 81001 | | |||||| || |||||||| | || || ||| ||||| ||||| |||| Sbjct 101896 CAGAGTACTCGATAATCTCCGTGCAGAGGTTGGAGCTGCGAATGGTACCAAGGTTCTTCT 101837 Query 81002 GGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCT 81061 |||| |||| |||||| |||||||| |||| ||||| |||| ||||| || Sbjct 101836 GGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAACGGGTTACCAGTCTCAGTCT 101777 Query 81062 GTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTT 81121 | | || ||||||| | ||||| | | ||||||| | |||||| || || Sbjct 101776 GAGCCTCCAGGATGGAATACCAAAGTTTCTGGGCCTTGATCGTCTTGCGACCCTTACCGG 101717 Query 81122 CGGCCACATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGT-GAAGTTCAGTGAGGTCT 81180 | | ||||||| | || | ||||||| |||||| | ||| | | |||| | Sbjct 101716 CCTGCTCATACTTCTCATACAGAGCCTCGAACTCTTCACCGTAGCAGTCC-GCGAGGCCA 101658 Query 81181 GGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAA 81240 ||||||||||| |||||||||| | ||||||| || ||||| || ||||||||| Sbjct 101657 GGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCCGTTTTTCTCAACGCGCTTCATGAAC 101598 Query 81241 GCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGG 81300 ||||||||||| || ||| ||||||||| ||| || |||||| | || ||| Sbjct 101597 AGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGGCACGAATCTCCTCCTTTCCGTGG 101538 Query 81301 TTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCG 81360 || | | ||||| || || | || || || ||||| ||||| || || | ||| Sbjct 101537 TTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGCGTGCCACGGCTCAAGGTAGATGGCA 101478 Query 81361 ATCGACCCCTTGCG---ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACA 81417 | | || ||| ||||||||||| |||||| || || || ||| || ||| Sbjct 101477 AAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCTGTGTTGTTGAACACA 101418 Query 81418 CGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTG 81477 |||| ||| || | || || | || ||||| ||||| ||||| || || || Sbjct 101417 CGCAGCATGGGAACAATGCCGTTCGAGGTGCCGTTGGTACCGGCGATATAGGAGCCAGTG 101358 Query 81478 GCGCGCACCTTGCTGATTGA----AAGACCGATGCCACCTGACCACTTTGAAATCTGAGC 81533 || || | ||| ||| || |||||||| || || | | ||| || ||| || Sbjct 101357 GCACGGA---TGC-GATGGACGTTGAGACCGATACCGCCAGCCATCTTGGAGATCATGGC 101302 Query 81534 ACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAA 81593 ||| || | ||| || || |||||||| ||||| || | ||||| |||| || ||| Sbjct 101301 ACAAGTCTTGAGGGTGTCGTAGATTCCCTCAATGCTGTCGTCCTTCATATCAACCAGGAA 101242 Query 81594 ACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAAT 81653 || |||| ||||| || |||||| ||||| || || |||| ||||| | Sbjct 101241 GCATGACGACAACTGAGCCTGCGGTGTGCCGGCGTTGAAAAGCGTCGGGGAGGCGTGTGT 101182 Query 81654 GAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTG 81713 ||| | | | ||||| |||| |||||||| |||| || ||| | |||||| Sbjct 101181 GAAGAATTTGCTAGACATAAGGTTGTAGGTTTCGATGACTCGCTCAATGTTGTCACCCCA 101122 Query 81714 AATACCGATAGCTACACGCATAAACATGTACTGGGGCGTCTCG 81756 ||||| | ||| |||||||| | ||||| ||| ||| ||||| Sbjct 101121 GATACCTACAGCAACACGCATGATCATGTGCTGTGGCCTCTCG 101079 >seq1312 Length=186730 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || ||||| || || || |||||||| ||||| | ||||| ||||| Sbjct 19479 ATGCAGATTTTCGTCAAAACCCTCACTGGCAAGACGATTACCTTGGAGGTCGAGTCCTCC 19538 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | ||| | ||| | || || |||||||||||||| |||||||| ||||| Sbjct 19539 GATACCATCGACAATGTAAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 19598 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || || ||||| ||||| ||||| || ||||| | ||| ||||| | ||||| || Sbjct 19599 CAACGCCTTATTTTCGCTGGAAAGCAGCTTGAGGACGGTCGGACCCTTTCCGACTACAAC 19658 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||||||||| ||| || ||| | ||| | ||||| || ||||| Sbjct 19659 ATCCAAAAGGAGAGCACCCTCCATTTGGTCCTTCGTCTCCGTGGTGG 19705 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| | || |||||||| || || | ||||| ||||| Sbjct 19707 ATGCAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACGTTGGAGGTCGAGTCTTCA 19766 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | || | || || || ||||||||||| |||||||| ||||| Sbjct 19767 GACACGATTGACAATGTTAAATCCAAGATCCAAGACAAGGAGGGTATTCCTCCGGACCAA 19826 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || ||||| ||||| | ||||||| || || || | ||||| || Sbjct 19827 CAGCGACTGATCTTCGCTGGAAAGCAGTTGGAGGATGGACGCACGCTGTCCGACTACAAC 19886 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||||||||| ||||| || | ||| ||||||| || ||||| Sbjct 19887 ATCCAAAAGGAATCTACTCTGCACTTGGTCCTGCGTCTGCGTGGTGG 19933 Score = 136 bits (150), Expect = 5e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || |||||||| || || || ||||| ||||| | |||| ||| | || | ||| | Sbjct 19275 ACTGGCAAGACCATCACCCTCGAGGTGGAGTCTAGCGATACCATCGACAACGTCAAGTCG 19334 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || |||||||||||||| || ||||| ||||| |||||||| |||||||| || ||| Sbjct 19335 AAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAACAGCGTCTTATTTTTGCCGGCAAG 19394 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 ||||||||||| | ||| || || | ||||| || |||| ||||| ||||| || Sbjct 19395 CAACTCGAGGACGGTCGGACACTTTCCGACTACAACATCCAGAAGGAGAGTACTCTCCAC 19454 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || || | || || || ||||| Sbjct 19455 CTCGTGCTCCGCCTCCGTGGTGG 19477 Score = 136 bits (150), Expect = 5e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||||||||||||||| || || || || || ||||| || Sbjct 19935 ATGCAAATCTTCGTCAAGACGCTTACCGGCAAAACCATCACACTCGAAGTTGAATCTTCA 19994 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | || | || ||||| ||||||||||| || || || ||||| Sbjct 19995 GACACAATCGACAACGTCAAATCAAAGATTCAAGACAAGGAGGGTATCCCGCCTGACCAA 20054 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| | || ||||| || ||||| || ||||||| | ||||| | || || ||| Sbjct 20055 CAACGTTTGATCTTTGCGGGCAAGCAGCTGGAGGATGGAAGAACCCTGTCTGATTACAAT 20114 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 | || ||||| || ||||| || || || | |||||||| || || || Sbjct 20115 ATTCAGAAGGAGTCGACTCTGCACCTTGTGCTCCGTCTTCGTGGCGGTCA 20164 >seq1903 Length=117364 Score = 154 bits (170), Expect = 2e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| ||||| |||||||| || || ||||||||||| || |||||||| ||||| Sbjct 77072 ATCATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCG 77013 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | || | ||| | ||| | ||| | || || |||||||||||||| || || || ||| Sbjct 77012 AGCGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGAC 76953 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||||| | || ||||| || ||||| || ||||| | | ||||| | ||||| Sbjct 76952 CAGCAGCGCTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCAGGACCCTGTCCGACTAC 76893 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || |||| ||||| ||| || || || || ||||||| || ||||| Sbjct 76892 AACATCCAGAAGGAGAGCACCCTCCACCTCGTGCTGCGTCTGCGTGGTGG 76843 >seq1441 Length=161736 Score = 125 bits (138), Expect = 8e-24 Identities = 137/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| || ||||| || || |||||||| || || | ||||| ||||| || | || Sbjct 98185 CTTCGTGAAGACTCTGACTGGCAAGACCATCACCTTGGAGGTCGAGTCCTCGGACACGAT 98126 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | ||| ||||| | || ||||||||||||||||||||||| || ||||| |||||||| Sbjct 98125 CGACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGAATTCCCCCTGACCAACAGCGTCT 98066 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 || |||||||| ||||| | ||||| | ||||| || | ||||| || |||| || Sbjct 98065 TATCTTTGCTGGCAAGCAGTTGGAGGACGGCCGTACTCTCTCCGACTACAACATCCAGAA 98006 Query 27594 GG 27595 || Sbjct 98005 GG 98004 >seq1567 Length=8880 Score = 82.4 bits (90), Expect = 9e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 64771 TCTATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTG 64830 || || |||||||| || ||||| ||||||||||| |||||| | || || |||||||| Sbjct 7303 TCCATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTGACTTTCTCCAACGAGCTC 7362 Query 64831 ATCTCTCGGGACGAGGGGCTCCACCAAGAATTTGCGGTTACCCTGTTC 64878 ||||| || || ||||| || ||| || ||||| | ||||||| Sbjct 7363 ATCTCGCGTGATGAGGGTCTACACACCGACTTTGCCTGTCTCCTGTTC 7410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570296684034880