Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F002218345.1_202017-07-14] 2,695 sequences; 39,383,118 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1826 127 2e-24 >seq1826 Length=279799 Score = 127 bits (140), Expect = 2e-24 Identities = 196/275 (71%), Gaps = 6/275 (2%) Strand=Plus/Plus Query 145995 GAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAA 146054 ||||||||| |||||||| ||| ||| |||| | | |||| ||| |||| || || Sbjct 159860 GAGCTGGTCGACGCCCTGGCCCGTGTAGTCTGCGTGGCAGTCGGTGTATTCGGCGCCAAA 159919 Query 146055 GTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGC-CCCAGCC 146113 ||| | ||| ||||| ||||||||||| |||||||| || ||| | |||| | | || Sbjct 159920 GTGGCGCCATTGGAAGCCGTAGACGGGGCCCAGGTCGCCCACCTCGCGGTGCTGCAATCC 159979 Query 146114 CGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGC 146171 | |||| | | ||||| || ||| |||||| |||||||||||||||| || | |||| Sbjct 159980 CAGCCC-GTCCAGGAACTCACGGCTGCCGTTGCCGTCCCAGATCTTGACCCCGGCGTCGC 160038 Query 146172 GGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCC 146231 || | || | ||| | ||| | |||||| |||||||| || || | Sbjct 160039 TCAGGG--GCTTCGCCGACGTCGCGCCCGACACGAACCACAGCAGCTCGAGGATCACGGC 160096 Query 146232 CCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 || | ||||||| | ||| || |||||||| |||| Sbjct 160097 CCGCGAGAAGACGCGCTTCGTCGTCAGCAGAGGGA 160131 Score = 122 bits (134), Expect = 1e-22 Identities = 124/162 (77%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 145690 TCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCG 145749 || ||||||| | ||||||||| || || |||| |||||| | | ||||||| | Sbjct 159474 TCGACGTGGTCGGCGTAGACGTGAGCATCGCCCATGACGTGCGTCAGCGACCCGGGCACT 159533 Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 || |||||| | || | ||||| |||||||| | ||||||||| |||||||||||| Sbjct 159534 AGACCCGTGGCACGCGCAATCATGTGCGTCAGCAGTGCGTAGCTGGCAATGTTGAAGGGC 159593 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851 || || || |||||||| | || |||||||| ||||||||| Sbjct 159594 ACGCCTAGGCCCATGTCGCAGGACCGCTGGTAGAGCTGGCAG 159635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590056921787800