Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F002218345.1_202017-07-14] 2,695 sequences; 39,383,118 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq1826 114 3e-20 >seq1826 Length=279799 Score = 114 bits (126), Expect = 3e-20 Identities = 257/388 (66%), Gaps = 20/388 (5%) Strand=Plus/Plus Query 254011 TGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAA 254070 |||| ||| |||| |||||||| || || ||||| || ||| |||| ||||||||| Sbjct 24515 TGCTCTTCTACGGCCCTCCCGGCACGGGTAAGACCTCGACCGTCCTCGCGCTGGCCAAGG 24574 Query 254071 CCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAAC 254130 || || ||| || ||||| ||||||||| ||||| ||||| || ||||||| Sbjct 24575 AGCTTTTCGGCCCGGAACTCATGAAGTCGCGCGTGCTGGAGCTCAACGCCTCGGACGAAC 24634 Query 254131 GCGGGTTGGACGTCGTCCGCGACAAGATCAA-GACTTTCTCCAAGATGTCGATTTCGTCG 254189 | || | | |||| || || ||| |||| |||||| || ||| | | | Sbjct 24635 GTGGCATCTCCATCGTGCGAGAAAAGGTCAAAGACTTTGCCCGC-ATGCAGCTCACCAAC 24693 Query 254190 TTCCAACCCGGCT------------------GTCCGCCTTTCAAGCTCGTGATCCTGGAC 254231 || ||||||| | ||||| |||||| | | ||||| ||| Sbjct 24694 CCCCCGCCCGGCTACAAGTCGAAGTACCCATGCCCGCCCTTCAAGATTATCATCCTCGAC 24753 Query 254232 GAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGATGGAGACGCAC 254291 ||||| ||| ||||||| ||||||||| ||| || || | || |||||||| || Sbjct 24754 GAGGCCGACTCCATGACCCAGGACGCGCAGAGCGCTCTGCGAAGGACCATGGAGACTTAC 24813 Query 254292 TCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCATCGCCCCGCTG 254351 | | ||||| || || ||| | ||||||||||| | ||||||| || ||| Sbjct 24814 AGCAAGATCACGCGGTTCTGTCTGATCTGCAACTACGTCACTCGCATCATCGATCCCCTG 24873 Query 254352 GCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 || || ||||| ||| ||||| |||| Sbjct 24874 GCATCCAGGTGCAGCAAATTTCGCTTCA 24901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073729323181760