Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F002218345.1_202017-07-14]
2,695 sequences; 39,383,118 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq2672 116 9e-21
seq1456 96.9 8e-15
>seq2672
Length=153342
Score = 116 bits (128), Expect = 9e-21
Identities = 126/167 (75%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428
|| ||||| || || ||||| || || || | |||||| || ||||| || || ||||||
Sbjct 55320 TCCTTCTGGATGTTGTAGTCGGAAAGTGTCCGACCGTCCTCGAGTTGCTTGCCGGCAAAA 55261
Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488
|| || | |||||| || ||||| || || || || ||||| ||||| | || || ||
Sbjct 55260 ATAAGACGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTG 55201
Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGT 104535
|| | ||||||||||| || ||||| || || || ||||| |||||
Sbjct 55200 TCGATGGTATCGCTAGACTCCACCTCGAGGGTGATGGTCTTGCCAGT 55154
Score = 107 bits (118), Expect = 4e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||||||||| || ||||| || ||||| || || || || || || ||
Sbjct 56010 GTCGACTCCTTCTGAATATTGTAATCAGACAGGGTTCTTCCATCCTCCAGCTGCTTGCCC 55951
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || | | ||||| ||||| || || || || || || |||||||||| |||
Sbjct 55950 GCAAAGATCAAACGTTGTTGGTCAGGCGGGATACCCTCCTTGTCTTGAATCTTTGATTTG 55891
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | || || || ||| || || ||||| || || || || ||||| ||
Sbjct 55890 ACGTTGTCGATTGTGTCTGAAGATTCAACTTCGAGTGTGATGGTTTTGCCGGTAAGCGTC 55831
Query 104543 TTTACAAATATCTGCAT 104559
|| || || || |||||
Sbjct 55830 TTGACGAAGATTTGCAT 55814
>seq1456
Length=257737
Score = 96.9 bits (106), Expect = 8e-15
Identities = 131/180 (73%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 104372 TTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATT 104431
||||| || || ||||| || ||||| | ||||| || | || || |||||||| ||
Sbjct 111031 TTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCCAACTGCTTGCCAGCAAAGATA 110972
Query 104432 AGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCT 104491
|| | |||||| ||||| || ||||| || || ||||||||||| | || ||||| ||
Sbjct 110971 AGACGCTGTTGGTCAGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 110912
Query 104492 ACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550
| || || | ||| || ||||| | || || ||||| ||||| || || || || ||
Sbjct 110911 ATCGTGTC-CGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAA 110853
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151358642573060
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |