Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F002218345.1_202017-07-14]
2,695 sequences; 39,383,118 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq1826 127 2e-24
>seq1826
Length=279799
Score = 127 bits (140), Expect = 2e-24
Identities = 157/213 (74%), Gaps = 4/213 (2%)
Strand=Plus/Plus
Query 6499 GAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTT 6558
||||| ||||||||| | ||||| || | |||||| ||||||| |||| |||||
Sbjct 159425 GAGCTCGGGGAACGGCCTCGGCTCGCGCTCCAGCTGCGTCCGGAGTGCGTCGACGTGGTC 159484
Query 6559 CAGGTAGATATGCGCATCCCCCA--ACGTATGCACCAGCTCCCCAGGAACCAACCCCACG 6616
||||| || ||||| |||| |||| || |||| ||| || || | ||| |
Sbjct 159485 GGCGTAGACGTGAGCATCGCCCATGACGT--GCGTCAGCGACCCGGGCACTAGACCCGTG 159542
Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676
|| | || ||||||| ||| ||||| ||||| || ||||||||||| ||||| ||||
Sbjct 159543 GCACGCGCAATCATGTGCGTCAGCAGTGCGTAGCTGGCAATGTTGAAGGGCACGCCTAGG 159602
Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAG 6709
|||||||| | || || || ||||||||||||
Sbjct 159603 CCCATGTCGCAGGACCGCTGGTAGAGCTGGCAG 159635
Score = 127 bits (140), Expect = 2e-24
Identities = 157/213 (74%), Gaps = 4/213 (2%)
Strand=Plus/Minus
Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695
|||||||||||| || || || | |||||||| |||| ||||| ||||||||||| ||
Sbjct 159635 CTGCCAGCTCTACCAGCGGTCCTGCGACATGGGCCTAGGCGTGCCCTTCAACATTGCCAG 159576
Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGT 34755
||||| ||||| ||| ||||||| || | || | ||| | || || ||| ||||
Sbjct 159575 CTACGCACTGCTGACGCACATGATTGCGCGTGCCACGGGTCTAGTGCCCGGGTCGCTGAC 159516
Query 34756 GCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCAG 34813
|| |||| |||| ||||| || ||||| ||||| |||| ||||||| |||
Sbjct 159515 GC--ACGTCATGGGCGATGCTCACGTCTACGCCGACCACGTCGACGCACTCCGGACGCAG 159458
Query 34814 CTGCAACGAGAGCCCCGACCGTTCCCCCAGCTC 34846
||| | || ||||| | ||||||||| |||||
Sbjct 159457 CTGGAGCGCGAGCCGAGGCCGTTCCCCGAGCTC 159425
Score = 125 bits (138), Expect = 6e-24
Identities = 279/408 (68%), Gaps = 12/408 (3%)
Strand=Plus/Plus
Query 6721 ATTCGCGACGTAGAATTG-GCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGAT 6779
|| || |||||| || || ||| | |||||||||| || || |||| || ||| |
Sbjct 159728 ATACGAGACGTAAAACTGCGCAAACA-TGTGGCACGGCGGCAGGACCATAAGCTTGAGGT 159786
Query 6780 CCTTCGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTG- 6838
|||| |||||||| || | | || || | | ||| | |||||| | | || |
Sbjct 159787 CCTTGGGGTTCCAAGCACTAAGAACCATGCGGCGGTCGTACGGGTTCG--TGC--GGAGC 159842
Query 6839 TCGATCACGTACT--GC-AGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCC 6895
| | |||| || || |||||||| | ||||| |||| ||||| || | || |
Sbjct 159843 TTGTGCACGACCTCGGCGAGCTGGTCGACGCCCTGGCCCGTGTAGTCTGCGTGGCAGTCG 159902
Query 6896 CGATACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCC 6955
|| || || |||||||| | ||| ||||| |||||||| ||||||| ||||||| ||
Sbjct 159903 GTGTATTCGGCGCCAAAGTGGCGCCATTGGAAGCCGTAGACGGGGCCCAGGTCGCCCACC 159962
Query 6956 TCCCGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATC 7015
|| || | || ||| || |||||| || || || |||| |||||||||||
Sbjct 159963 TCGCGGTGCTGCAATCCCAGCCCGTCCAGGAACTCACGGCTGCCGTTGCCGTCCCAGATC 160022
Query 7016 TTCACCCCCCGGGACG-AGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAG 7074
|| | |||| | | || || ||| | ||| || ||| |||||||||||||||
Sbjct 160023 TTGA-CCCCGGCGTCGCTCAGGGGCTTCGCCGACGTCGCGCCCGACACGAACCACAGCAG 160081
Query 7075 CTCCTCGACCACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGG 7122
||| || |||| || | || | || || |||||||||||||| ||
Sbjct 160082 CTCGAGGATCACGGCCCGCGAGAAGACGCGCTTCGTCGTCAGCAGAGG 160129
Score = 125 bits (138), Expect = 6e-24
Identities = 279/408 (68%), Gaps = 12/408 (3%)
Strand=Plus/Minus
Query 34223 CCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTC 34282
|| |||||||||||||| || || | || | || |||| || |||||||||||||||
Sbjct 160129 CCTCTGCTGACGACGAAGCGCGTCTTCTCGCGGGCCGTGATCCTCGAGCTGCTGTGGTTC 160070
Query 34283 GTGAGGGGGGCCACGAACACCAAGGAGCTCT-CGTCCCGGGGGGTGAAGATCTGGGACGC 34341
||| ||| || ||| | ||| || || | | |||| | |||||||||||||
Sbjct 160069 GTGTCGGGCGCGACGTCGGCGAAGCCCCTGAGCGACGCCGGGG-TCAAGATCTGGGACGG 160011
Query 34342 TCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTT 34401
|||| || || || |||||| || ||| || | || |||| ||||||| |
Sbjct 160010 CAACGGCAGCCGTGAGTTCCTGGACGGGCTGGGATTGCAGCACCGCGAGGTGGGCGACCT 159951
Query 34402 GGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCGAAGC 34461
|||||| |||||||| ||||| ||| | |||||||| || || || | || | ||
Sbjct 159950 GGGCCCCGTCTACGGCTTCCAATGGCGCCACTTTGGCGCCGAATACACCGACTGCCACGC 159891
Query 34462 GGACTATTCGGGACAGGGAGCGGACCAGCT-GC--AGTACGTGATCGA-CACCTTGAAGC 34517
||||| |||| ||||| | |||||||| || || |||| | | | || | |
Sbjct 159890 AGACTACACGGGCCAGGGCGTCGACCAGCTCGCCGAGGTCGTGCACAAGCTCC--GCA-- 159835
Query 34518 GGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGA 34577
|||||| | ||| | | || || | | || |||||||| ||||| ||| || |
Sbjct 159834 CGAACCCGTACGACCGCCGCATGGTTCTTAGTGCTTGGAACCCCAAGGACCTCAAGCTTA 159775
Query 34578 TGGCGCTCCCCCCGTGCCACACCCTCTGC-CAATTCTACGTCGCGAAT 34624
||| || || |||||||||| | ||| || || |||||| || ||
Sbjct 159774 TGGTCCTGCCGCCGTGCCACA-TGTTTGCGCAGTTTTACGTCTCGTAT 159728
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448247299160400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |