Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F002218355.1_202017-07-14] 2,879 sequences; 39,272,241 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq1590 95.1 1e-14 >seq1590 Length=118394 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||| | |||| ||| |||||||| ||||| || || || | | Sbjct 20224 CCGCCACGAAGACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGAC 20165 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 |||||| | ||||||||||| ||||||||| | || | | || ||||| || Sbjct 20164 AGGGTTCTTCCATCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGGG 20105 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| ||| || | | ||| || || | || | Sbjct 20104 ATACCCTCCTTGTCTTGAATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAACT 20045 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || ||||| |||||||| | ||| ||||| || |||||||| Sbjct 20044 TCGAGTGTGATGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 19998 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | || |||| |||| ||| || |||||||| ||||| ||||| | | Sbjct 19996 CCACCACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 19937 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | | ||||||| ||| || || || | || |||| ||| |||||| || Sbjct 19936 AGCGTGCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGA 19877 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| ||| || | | | | || || | ||| Sbjct 19876 ATACCCTCCTTGTCTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACC 19817 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || ||||||||||| || || || ||||| || || ||||| Sbjct 19816 TCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 19770 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||| | || | ||| |||||| || ||||| ||||| | Sbjct 19540 CCACCACGGAGGCGGAGCACGAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGAA 19481 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | ||||||| || || ||||| ||| ||||||| | ||| |||||| || Sbjct 19480 AGTGTCCGACCGTCCTCGAGTTGCTTGCCGGCAAAAATAAGACGCTGTTGGTCCGGAGGG 19421 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| || || | | ||| ||||| | | |||| Sbjct 19420 ATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCGCTAGACTCCACC 19361 Query 21129 TCCACGGTAATGGTCTTGCCGGT 21151 || | ||| ||||||||||| || Sbjct 19360 TCGAGGGTGATGGTCTTGCCAGT 19338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422244383848364