Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F002218355.1_202017-07-14]
2,879 sequences; 39,272,241 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq1590 125 5e-23
>seq1590
Length=118394
Score = 125 bits (138), Expect = 5e-23
Identities = 159/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
|||||||||||| ||||| || || || || || || ||| ||||||| || ||
Sbjct 20219 ACGAAGACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGACAGGGT 20160
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
||| ||| || || ||||| || ||||| || | ||||||||| ||||| || || ||
Sbjct 20159 TCTTCCATCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGGGATACC 20100
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730
|||||||||||||||||| |||||| || || || || | | | ||| ||
Sbjct 20099 CTCCTTGTCTTGAATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAACTTCGAG 20040
Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || ||||| ||||| || ||||| ||||| |||||
Sbjct 20039 TGTGATGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTG 20001
Score = 93.3 bits (102), Expect = 3e-13
Identities = 114/153 (75%), Gaps = 2/153 (1%)
Strand=Plus/Minus
Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677
|| ||||| ||||||||||| |||||||| |||||||| || |||||||| || ||||||
Sbjct 19696 TCCTCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTG 19637
Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAAT 480736
|| || ||||| || ||| || || ||||| | | | | | ||| ||||||
Sbjct 19636 TCCTGGATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTCGACCTCCAA-GGTAAT 19578
Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || || ||||| || || |||||||| ||
Sbjct 19577 CGTCTTGCCAGTGAGGGTTTTGACGAAAATCTG 19545
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268055705721092
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |